WormBase Tree Display for Expression_cluster: WBPaper00039866:SAM_daf-19_upregulated

WBPaper00039866:SAM_daf-19_upregulated Description: Candidate daf-19 up regulated genes with a statistically significant signal variation of 1.5-fold or greater. These were identified using a Significance Analysis of Microarrays (SAM).
  Species: Caenorhabditis elegans
  Algorithm: Lists of genes were generated using SAM (version 2.2) with a false discovery rate (FDR) of less than or equal to 5% (Q-value <= 5%). Twenty-seven repeated runs of SAM were performed using variable random seed numbers for each run. During each run of SAM, 100 permutations were performed. Genes (n =129 downregulated, n = 1 upregulated) appearing in at least 80% of all twenty-seven runs of SAM were further considered for signal variation filtering, which was used to selectively identify genes with a 1.5-fold or greater variation between the two genetic conditions used for comparison.
  Reference: WBPaper00039866
  Microarray_results: 188282_at Fold change(Up): 4.3
    173687_s_at Fold change(Up): 4.3
    192266_s_at Fold change(Up): 3.9
    178132_at Fold change(Up): 3.9
    173163_s_at Fold change(Up): 3.7
    191219_at Fold change(Up): 3.7
    176055_at Fold change(Up): 3.6
    173200_s_at Fold change(Up): 3.5
    184927_s_at Fold change(Up): 3.5
    190344_at Fold change(Up): 3.4
    176618_at Fold change(Up): 3.3
    175162_s_at Fold change(Up): 3.2
    189087_s_at Fold change(Up): 3.0
    192010_s_at Fold change(Up): 3.0
    181249_at Fold change(Up): 3.0
    193344_at Fold change(Up): 2.9
    190356_at Fold change(Up): 2.9
    180642_at Fold change(Up): 2.9
    188634_s_at Fold change(Up): 2.8
    191626_s_at Fold change(Up): 2.7
    181932_at Fold change(Up): 2.7
    186342_at Fold change(Up): 2.7
    191800_at Fold change(Up): 2.6
    187318_at Fold change(Up): 2.6
    190958_s_at Fold change(Up): 2.6
    187193_at Fold change(Up): 2.6
    184676_s_at Fold change(Up): 2.6
    191607_s_at Fold change(Up): 2.5
    189986_at Fold change(Up): 2.5
    179206_at Fold change(Up): 2.5
    175918_at Fold change(Up): 2.4
    189460_at Fold change(Up): 2.4
    172772_x_at Fold change(Up): 2.4
    182513_at Fold change(Up): 2.4
    178376_s_at Fold change(Up): 2.4
    172287_x_at Fold change(Up): 2.4
    189915_s_at Fold change(Up): 2.4
    171941_s_at Fold change(Up): 2.4
    178775_at Fold change(Up): 2.4
    171947_x_at Fold change(Up): 2.4
    191394_s_at Fold change(Up): 2.4
    175636_at Fold change(Up): 2.4
    176668_at Fold change(Up): 2.3
    175681_at Fold change(Up): 2.3
    187926_s_at Fold change(Up): 2.3
    177209_at Fold change(Up): 2.3
    177549_s_at Fold change(Up): 2.3
    172434_at Fold change(Up): 2.2
    190966_at Fold change(Up): 2.2
    180263_s_at Fold change(Up): 2.2
    184160_at Fold change(Up): 2.2
    179107_s_at Fold change(Up): 2.2
    192259_s_at Fold change(Up): 2.2
    174886_at Fold change(Up): 2.2
    184992_at Fold change(Up): 2.2
    174252_at Fold change(Up): 2.1
    171736_x_at Fold change(Up): 2.1
    192568_at Fold change(Up): 2.1
    187626_s_at Fold change(Up): 2.1
    188252_at Fold change(Up): 2.1
    174751_at Fold change(Up): 2.0
    174407_at Fold change(Up): 2.0
    179302_at Fold change(Up): 1.8
  Gene: WBGene00002016
    WBGene00011231
    WBGene00002026
    WBGene00008070
    WBGene00011304
    WBGene00270321
    WBGene00001105
    WBGene00002124
    WBGene00013145
    WBGene00009156
    WBGene00004813
    WBGene00015613
    WBGene00002015
    WBGene00002008
    WBGene00020205
    WBGene00006366
    WBGene00018725
    WBGene00016088
    WBGene00014199
    WBGene00015569
    WBGene00017154
    WBGene00003055
    WBGene00009691
    WBGene00011509
    WBGene00006956
    WBGene00000217
    WBGene00019751
    WBGene00010236
    WBGene00018259
    WBGene00000512
    WBGene00004819
    WBGene00023259
    WBGene00006649
    WBGene00014141
    WBGene00010362
    WBGene00007153
    WBGene00007225
    WBGene00000865
    WBGene00001828
    WBGene00016295
    WBGene00000868
    WBGene00003977
    WBGene00001853
    WBGene00007479
    WBGene00007481
    WBGene00018743
    WBGene00007517
    WBGene00016457
    WBGene00007303
    WBGene00010051
    WBGene00002125
    WBGene00001821
    WBGene00016345
    WBGene00022816
    WBGene00004786
    WBGene00006981
    WBGene00012552
    WBGene00004821
    WBGene00018152
    WBGene00009049
  Attribute_of: Microarray_experiment: WBPaper00039866:daf-19_daf-12_rep1
      WBPaper00039866:daf-19_daf-12_rep2
      WBPaper00039866:daf-19_daf-12_rep3
      WBPaper00039866:daf-19_daf-12_rep4
      WBPaper00039866:daf-12_rep1
      WBPaper00039866:daf-12_rep2
      WBPaper00039866:daf-12_rep3
      WBPaper00039866:daf-12_rep4
      WBPaper00039866:WT_rep1
      WBPaper00039866:WT_rep2
      WBPaper00039866:WT_rep3
      WBPaper00039866:WT_rep4
  Regulation: Regulated_by_gene: WBGene00000914
  Associated_with: Life_stage: WBls:0000020