WormBase Tree Display for Gene: WBGene00013145
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| WBGene00013145 | SMap | S_parent | Sequence | Y53C12B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cutl-2 | Person_evidence | WBPerson52 | |||||
| Sequence_name | Y53C12B.6 | ||||||||
| Molecular_name | Y53C12B.6 | ||||||||
| Y53C12B.6.1 | |||||||||
| CE14904 | |||||||||
| Other_name | CELE_Y53C12B.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | cutl-2 | ||||||||
| DB_info | Database | AceView | gene | 2K12 | |||||
| WormQTL | gene | WBGene00013145 | |||||||
| WormFlux | gene | WBGene00013145 | |||||||
| NDB | locus_tag | CELE_Y53C12B.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013145|UniProtKB=O18213 | |||||||
| family | PTHR22907 | ||||||||
| NCBI | gene | 174532 | |||||||
| RefSeq | protein | NM_063696.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315307 | |||||||
| TrEMBL | UniProtAcc | O18213 | |||||||
| UniProt_GCRP | UniProtAcc | O18213 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 May 2008 10:04:34 | WBPerson2970 | Name_change | CGC_name | cutl-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cutl | ||||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; ABarppaapa; and anterior hypodermis based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-one chemicals including 1-methylnicotinamide; methylmercuric chloride; and mianserin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Zona pellucida domain and Zona pellucida-like domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y53C12B.6 | |||||||
| Corresponding_transcript | Y53C12B.6.1 | ||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020915 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057259 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037407 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026004 | ||||||||
| Expr1035836 | |||||||||
| Expr1160696 | |||||||||
| Expr2010627 | |||||||||
| Expr2028867 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction (148) | |||||||||
| Map_info | Map | II | Position | 1.68645 | Error | 0.00768 | |||
| Positive | Positive_clone | Y53C12B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065331 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
