WormBase Tree Display for Expression_cluster: WBPaper00039866:SAM_daf-19_upregulated
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| WBPaper00039866:SAM_daf-19_upregulated | Description | Candidate daf-19 up regulated genes with a statistically significant signal variation of 1.5-fold or greater. These were identified using a Significance Analysis of Microarrays (SAM). | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Lists of genes were generated using SAM (version 2.2) with a false discovery rate (FDR) of less than or equal to 5% (Q-value <= 5%). Twenty-seven repeated runs of SAM were performed using variable random seed numbers for each run. During each run of SAM, 100 permutations were performed. Genes (n =129 downregulated, n = 1 upregulated) appearing in at least 80% of all twenty-seven runs of SAM were further considered for signal variation filtering, which was used to selectively identify genes with a 1.5-fold or greater variation between the two genetic conditions used for comparison. | ||
| Reference | WBPaper00039866 | ||
| Microarray_results (63) | |||
| Gene | WBGene00002016 | ||
| WBGene00011231 | |||
| WBGene00002026 | |||
| WBGene00008070 | |||
| WBGene00011304 | |||
| WBGene00270321 | |||
| WBGene00001105 | |||
| WBGene00002124 | |||
| WBGene00013145 | |||
| WBGene00009156 | |||
| WBGene00004813 | |||
| WBGene00015613 | |||
| WBGene00002015 | |||
| WBGene00002008 | |||
| WBGene00020205 | |||
| WBGene00006366 | |||
| WBGene00018725 | |||
| WBGene00016088 | |||
| WBGene00014199 | |||
| WBGene00015569 | |||
| WBGene00017154 | |||
| WBGene00003055 | |||
| WBGene00009691 | |||
| WBGene00011509 | |||
| WBGene00006956 | |||
| WBGene00000217 | |||
| WBGene00019751 | |||
| WBGene00010236 | |||
| WBGene00018259 | |||
| WBGene00000512 | |||
| WBGene00004819 | |||
| WBGene00023259 | |||
| WBGene00006649 | |||
| WBGene00014141 | |||
| WBGene00010362 | |||
| WBGene00007153 | |||
| WBGene00007225 | |||
| WBGene00000865 | |||
| WBGene00001828 | |||
| WBGene00016295 | |||
| WBGene00000868 | |||
| WBGene00003977 | |||
| WBGene00001853 | |||
| WBGene00007479 | |||
| WBGene00007481 | |||
| WBGene00018743 | |||
| WBGene00007517 | |||
| WBGene00016457 | |||
| WBGene00007303 | |||
| WBGene00010051 | |||
| WBGene00002125 | |||
| WBGene00001821 | |||
| WBGene00016345 | |||
| WBGene00022816 | |||
| WBGene00004786 | |||
| WBGene00006981 | |||
| WBGene00012552 | |||
| WBGene00004821 | |||
| WBGene00018152 | |||
| WBGene00009049 | |||
| Attribute_of | Microarray_experiment (12) | ||
| Regulation | Regulated_by_gene | WBGene00000914 | |
| Associated_with | Life_stage | WBls:0000020 |
