WormBase Tree Display for Gene: WBGene00007932

WBGene00007932 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 2
    Name: CGC_name: zip-5 Person_evidence: WBPerson3520
            WBPerson460
      Sequence_name: C34D1.5
      Molecular_name: C34D1.5a
        C34D1.5a.1
        CE18541
        C34D1.5b
        CE42551
        C34D1.5c
        CE42550
        C34D1.5b.1
        C34D1.5c.1
      Other_name: CELE_C34D1.5 Accession_evidence: NDB BX284605
      Public_name: zip-5
    DB_info: Database: AceView gene 5N749
        WormQTL gene WBGene00007932
        WormFlux gene WBGene00007932
        NDB locus_tag CELE_C34D1.5
        Panther gene CAEEL|WormBase=WBGene00007932|UniProtKB=G5EBE5
          family PTHR13044
        NCBI gene 183204
        RefSeq protein NM_001129402.1
            NM_001129401.4
            NM_073891.3
        TREEFAM TREEFAM_ID TF318903
        TrEMBL UniProtAcc G5EG34
            B1V8I9
            G5EBE5
        UniProt_GCRP UniProtAcc G5EBE5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Nov 2006 11:33:19 WBPerson1847 Name_change: CGC_name: zip-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: zip
    Allele: WBVar01975222
      WBVar00012265
      WBVar00012270
      WBVar00012275
      WBVar01498809
      WBVar01462434
      WBVar01499560
      WBVar00474522
      WBVar00474523
      WBVar01869317
      WBVar00474524
      WBVar00474525
      WBVar01869318
      WBVar01869319
      WBVar00474526
      WBVar00474527
      WBVar01869320
      WBVar00474528
      WBVar01060262
      WBVar01869321
      WBVar01060263
      WBVar01869322
      WBVar00474529
      WBVar01060264
      WBVar00474530
      WBVar01060265
      WBVar00474531
      WBVar01060266
      WBVar00474532
      WBVar01060267
      WBVar02061760
      WBVar00474533
      WBVar01060268
      WBVar02061761
      WBVar02061762
      WBVar01060269
      WBVar02061763
      WBVar01060270
      WBVar01060271
      WBVar01060272
      WBVar01060273
      WBVar01060274
      WBVar01060275
      WBVar01060276
      WBVar01060277
      WBVar01060278
      WBVar01060279
      WBVar01060280
      WBVar01060281
      WBVar01060282
      WBVar01060283
      WBVar01060284
      WBVar01499621
      WBVar01743903
      WBVar01743904
      WBVar01743905
      WBVar01808967
      WBVar01500212
      WBVar01500213
      WBVar01498742
      WBVar00145978
      WBVar01499299
      WBVar01499316
      WBVar02024464
      WBVar02043684
      WBVar02043685
      WBVar00250984
    Strain: WBStrain00036563
    RNASeq_FPKM (74)
    GO_annotation: 00005737
      00005738
      00005739
      00009368
      00009369
      00115916
      00115917
    Ortholog (18)
    Paralog: WBGene00000221 Caenorhabditis elegans From_analysis: Panther
      WBGene00012330 Caenorhabditis elegans From_analysis: Panther
      WBGene00077761 Caenorhabditis elegans From_analysis: Panther
      WBGene00013878 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: zip-5 encodes a bZip transcription factor; a zip-5::gfp promoter reporter gene fusion is expressed primarily in the nervous system, with mid- and late-stage embryos showing strong expression in head neurons, while larvae show expression in the ventral nerve cord and head and tail neurons; adults also show GFP expression in head muscles and intermittently in the intestine. Paper_evidence: WBPaper00029055
          Curator_confirmed: WBPerson1843
          Date_last_updated: 12 Feb 2008 00:00:00
      Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Expressed in head muscle; head neurons; tail neurons; and ventral nerve cord. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34D1.5a
      C34D1.5b
      C34D1.5c
    Corresponding_transcript: C34D1.5a.1
      C34D1.5b.1
      C34D1.5c.1
    Other_sequence: CBC08146_1
    Associated_feature: WBsf662010
      WBsf662011
      WBsf662012
      WBsf717270
      WBsf978371
      WBsf1001781
    Transcription_factor: WBTranscriptionFactor000225
  Experimental_info: RNAi_result: WBRNAi00115932 Inferred_automatically: RNAi_primary
      WBRNAi00041862 Inferred_automatically: RNAi_primary
      WBRNAi00011589 Inferred_automatically: RNAi_primary
      WBRNAi00029515 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7465
      Expr16388
      Expr1010880
      Expr1033442
      Expr1145881
      Expr2018159
      Expr2036296
    Drives_construct: WBCnstr00012609
      WBCnstr00033372
      WBCnstr00042989
    Construct_product: WBCnstr00021776
      WBCnstr00033372
    Microarray_results (18)
    Expression_cluster: WBPaper00033070:Rhine_downregulated
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00041222:unc-120(st364)_downregulated
      WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044030:nhr-8(hd117)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045050:csr-1(hypomorph)_upregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045417:128Q-huntingtin_downreglated
      WBPaper00045521:Gender_Neutral
      WBPaper00045861:ash-2(tm1095)_upregulated
      WBPaper00045861:wdr-5(ok1417)_upregulated
      WBPaper00046338:intestine_unique
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
      WBPaper00048952:glucose_repressed
      WBPaper00048988:daf-16(mu86)_downregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049018:swsn-2.2(RNAi)_upregulated
      WBPaper00049498:npr-1(ur89)_regulated_2
      WBPaper00049498:npr-1(ur89)_regulated_7
      WBPaper00049545:cco-1(RNAi)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050121:mir-60(n4947)_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
      WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:intestine_enriched
      WBPaper00051137:Orsay-virus_upregulated_rde-1(ne219)
      WBPaper00051265:F4_morc-1(tm6048)_downregulated
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051404:alg-2(ok304)_downregulated
      WBPaper00051404:alg-5(ram2)_downregulated
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053020:sta-1(ok587)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053302:stavudine_72h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055226:ADR-2_target_adr-1(tm668)
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00056073:R24_upregulated_nhr-86_dependent
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056275:P.aeruginosa_upregulated
      WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
      WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
      WBPaper00056293:rpl-5(0)-rpl-33(0)_upregulated
      WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056586:kri-1(ok1251)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057068:Cadmium_upregulated
      WBPaper00057196:raga-1(ok386)_upregulated)
      WBPaper00057347:nhr-14(tm1473)_upreglated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058955:heatshock_upregulated_CE
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_upregulated
      WBPaper00059421:daf-1(m40)_upregulated
      WBPaper00059537:ngn-1(ok2200)_upregulated
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059735:glucose_downregulated_lpin-1(RNAi)
      WBPaper00059735:glucose_downregulated_N2
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00059895:wounding_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060278:atp-2(RNAi)_upregulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060526:plp-1(ok2155)_downregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060871:M.humicola-extract_1h_regulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061007:X.citri_upregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061274:hypergravity_15xg_downregulated
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061527:F58F9.3_11574-R07B7.6
      WBPaper00061823:mex-3(spr9)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062587:lsl-1(ljm1)_upregulated
      WBPaper00062587:lsl-1(tm4769)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064107:lin-35(n745)_upregulated
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00064494:postdauer_downregulated_AWA
      WBPaper00064539:nhr-114(gk849)_upregulated
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064762:freezing-thaw_regulated
      WBPaper00064788:ketamine_upregulated
      WBPaper00064871:PA14_upregulated_AWA
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065288:mdt-15(tm2182)_upregulated
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00065835:mtH2S-AP39-L1-treatment_downregulated_Day1
      WBPaper00065841:35_1
      WBPaper00065841:35_2
      WBPaper00065841:35_3
      WBPaper00065841:60_0
      WBPaper00065841:61_0
      WBPaper00065841:75_0
      WBPaper00065841:77_0
      WBPaper00065841:80_0
      WBPaper00065841:103_0
      WBPaper00065841:106_0
      WBPaper00065841:122_0
      WBPaper00065841:139_0
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065995:M.humicola-extract_upregulated_old-1(ok1273)
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      cgc4489_group_14
      WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
      WBPaper00025099:MA_specific
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00028789:PA14_vs_OP50_upregulated_4hr
      WBPaper00029437:dcr-1_upregulated
      WBPaper00031003:hlh_1_enriched
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035227:heat_shock_regulated
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00035873:dpy-9_regulated
      WBPaper00036383:ash-2_Day8_regulated
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00038231:Cry5B_2-fold_upregulated
      WBPaper00038304:octr-1_regulated
      WBPaper00039866:ClassComp_daf-19_downregulated
      WBPaper00039866:SAM_daf-19_downregulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.5
      WBPaper00040963:Q200_down
      WBPaper00041207:CE_dauer_up
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00042574:JU1580_OrsayVirus_upregulated
      WBPaper00044013:nasp-1_downregulated
      WBPaper00044091:Bpseudomallei_induced_2h
      WBPaper00044091:Bpseudomallei_induced_8h
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00050515:nipi-3(fr4)_upregulated
      WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
      WBPaper00055899:nitroguanidine_regulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction (13)
  Map_info: Map: V Position: 5.04755 Error: 0.021484
    Positive: Positive_clone: C34D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00031111
    WBPaper00038487
    WBPaper00064871
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene