WormBase Tree Display for Expression_cluster: WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
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| WBPaper00048989:eat-2(ad465)_rapamycin_downregulated | Description | Genes from eat-2(ad465) animals with significantly decreased expression after 72 hours of treatment on growth media with 10uM rapamycin in 2% DMSO. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Analysis of gene expression data was carried out with the Affymetrix Transcriptome Analysis Console. Data preprocessing (using RMA normalization) and QC metrics were performed using Affymetrix Expression Console TM and manually inspected afterwards. Expression analysis was carried out for each two pairwise conditions. FDR statistical correction for multiple testing resulted in a slightly lower number of DEGs in most cases. P-value < 0.05 and fold change > 2.0 were used to determine differentially expressed genes. | ||
| Reference | WBPaper00048989 | ||
| Microarray_results (2556) | |||
| Gene (2215) | |||
| Attribute_of | Microarray_experiment | WBPaper00048989:eat-2(ad465)_control_rep1 | |
| WBPaper00048989:eat-2(ad465)_control_rep2 | |||
| WBPaper00048989:eat-2(ad465)_control_rep3 | |||
| WBPaper00048989:eat-2(ad465)_rapamycin_rep1 | |||
| WBPaper00048989:eat-2(ad465)_rapamycin_rep2 | |||
| WBPaper00048989:eat-2(ad465)_rapamycin_rep3 | |||
| Regulation | Regulated_by_molecule | WBMol:00004127 | |
| Associated_with | Life_stage | WBls:0000066 |
