WormBase Tree Display for Expression_cluster: WBPaper00039866:SAM_daf-19_downregulated
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| WBPaper00039866:SAM_daf-19_downregulated | Description | Candidate daf-19 down regulated genes with a statistically significant signal variation of 1.5-fold or greater. These were identified using a Significance Analysis of Microarrays (SAM). | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Lists of genes were generated using SAM (version 2.2) with a false discovery rate (FDR) of less than or equal to 5% (Q-value <= 5%). Twenty-seven repeated runs of SAM were performed using variable random seed numbers for each run. During each run of SAM, 100 permutations were performed. Genes (n =129 downregulated, n = 1 upregulated) appearing in at least 80% of all twenty-seven runs of SAM were further considered for signal variation filtering, which was used to selectively identify genes with a 1.5-fold or greater variation between the two genetic conditions used for comparison. | ||
| Reference | WBPaper00039866 | ||
| Microarray_results (195) | |||
| Gene (194) | |||
| Attribute_of | Microarray_experiment (12) | ||
| Regulation | Regulated_by_gene | WBGene00000914 | |
| Associated_with | Life_stage | WBls:0000020 |
