WormBase Tree Display for Gene: WBGene00077761
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| WBGene00077761 | SMap | S_parent | Sequence | F17C11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | ||||||||
| Name | CGC_name | zip-9 | Person_evidence | WBPerson260 | ||||||
| WBPerson460 | ||||||||||
| Sequence_name | F17C11.17 | |||||||||
| Molecular_name | F17C11.17 | |||||||||
| F17C11.17.1 | ||||||||||
| CE51797 | ||||||||||
| Other_name | CELE_F17C11.17 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | zip-9 | |||||||||
| DB_info | Database | WormFlux | gene | WBGene00077761 | ||||||
| NDB | locus_tag | CELE_F17C11.17 | ||||||||
| Panther | gene | CAEEL|WormBase=WBGene00077761|UniProtKB=A0A1I6CMA8 | ||||||||
| family | PTHR13044 | |||||||||
| NCBI | gene | 36805003 | ||||||||
| RefSeq | protein | NM_001392604.1 | ||||||||
| TREEFAM | TREEFAM_ID | TF319603 | ||||||||
| TrEMBL | UniProtAcc | A0A1I6CMA8 | ||||||||
| UniProt_GCRP | UniProtAcc | A0A1I6CMA8 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 23 May 2008 17:06:39 | WBPerson4025 | Event | Created | ||||
| 2 | 23 Sep 2011 16:44:07 | WBPerson2970 | Name_change | CGC_name | zip-9 | |||||
| 3 | 22 Feb 2016 11:46:52 | WBPerson4025 | Event | Acquires_merge | WBGene00008913 | |||||
| 4 | 25 Oct 2016 15:25:53 | WBPerson4025 | Event | Changed_class | Pseudogene | CDS | ||||
| 5 | 06 Mar 2018 15:00:46 | WBPerson4025 | Event | Split_into | WBGene00303011 | |||||
| Acquires_merge | WBGene00008913 | |||||||||
| Split_into | WBGene00303011 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Gene_class | zip | |||||||||
| Allele (36) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation (11) | ||||||||||
| Contained_in_operon | CEOP5616 | |||||||||
| Ortholog (24) | ||||||||||
| Paralog | WBGene00000221 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00007932 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00012330 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00013878 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00303011 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | F17C11.17 | ||||||||
| Corresponding_CDS_history | F17C11.17:wp252 | |||||||||
| F17C11.17a:wp264 | ||||||||||
| F17C11.17b:wp264 | ||||||||||
| Corresponding_transcript | F17C11.17.1 | |||||||||
| Corresponding_pseudogene_history | F17C11.17:wp256 | |||||||||
| Other_sequence | CR04786 | |||||||||
| CRC09706_1 | ||||||||||
| CRC04349_1 | ||||||||||
| Associated_feature | WBsf647215 | |||||||||
| WBsf661667 | ||||||||||
| WBsf981995 | ||||||||||
| WBsf1001236 | ||||||||||
| WBsf1001237 | ||||||||||
| WBsf1001238 | ||||||||||
| WBsf1001239 | ||||||||||
| WBsf1020385 | ||||||||||
| WBsf1020386 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00044870 | Inferred_automatically | RNAi_primary | ||||||
| Expr_pattern | Expr10304 | |||||||||
| Expr10305 | ||||||||||
| Expr1010615 | ||||||||||
| Expr1023820 | ||||||||||
| Expr1033878 | ||||||||||
| Expr1040411 | ||||||||||
| Expr1148834 | ||||||||||
| Expr1148839 | ||||||||||
| Expr2018163 | ||||||||||
| Expr2036300 | ||||||||||
| Drives_construct | WBCnstr00015241 | |||||||||
| Microarray_results (28) | ||||||||||
| Expression_cluster (127) | ||||||||||
| Interaction | WBInteraction000523810 | |||||||||
| WBInteraction000523812 | ||||||||||
| Map_info | Map | V | Position | 2.83311 | Error | 0.000738 | ||||
| Positive | Positive_clone | F17C11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00032230 | |||||||||
| WBPaper00064415 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
