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WormBase Tree Display for Variation: WBVar00143617

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Name Class

WBVar00143617NamePublic_namee937
Other_nameK04F10.4d.2:c.1971+275_1971+3600del
K04F10.4h.1:c.1971+275_*310del
K04F10.4i.1:c.1971+275_1972-438del
K04F10.4d.1:c.1971+275_1971+3600del
K04F10.4b.1:c.1971+275_1971+3600del
K04F10.4j.1:c.1971+275_1972-752del
K04F10.4c.1:c.1971+275_1971+3600del
HGVSgCHROMOSOME_I:g.6345831_6349156del
Sequence_detailsSMapS_parentSequenceK04F10
Flanking_sequencesaaattgaaaaattgaaaaaatcaacaaaattaatttccctgaatggaatttcaaccaaat
Mapping_targetK04F10
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000056
WBStrain00000080
WBStrain00000081
WBStrain00000267
WBStrain00000285
WBStrain00000460
WBStrain00000495
WBStrain00003836
WBStrain00003849
WBStrain00003850
WBStrain00003851
WBStrain00003938
WBStrain00003943
WBStrain00003948
WBStrain00003949
WBStrain00003969
WBStrain00003972
WBStrain00004219
WBStrain00004790
WBStrain00004797
WBStrain00004948
WBStrain00004956
WBStrain00004957
WBStrain00004978
WBStrain00004980
WBStrain00004983
WBStrain00005006
WBStrain00005015
WBStrain00005021
WBStrain00005197
WBStrain00005200
WBStrain00005201
WBStrain00005202
WBStrain00005203
WBStrain00005208
WBStrain00005458
WBStrain00005494
WBStrain00005605
WBStrain00005641
WBStrain00005642
WBStrain00005662
WBStrain00005668
WBStrain00005669
WBStrain00005679
WBStrain00005695
WBStrain00005712
WBStrain00005794
WBStrain00005796
WBStrain00005800
WBStrain00006441
WBStrain00007127
WBStrain00007139
WBStrain00007147
WBStrain00007149
WBStrain00007150
WBStrain00007264
WBStrain00007273
WBStrain00007274
WBStrain00007278
WBStrain00007279
WBStrain00007280
WBStrain00007281
WBStrain00007282
WBStrain00007331
WBStrain00007372
WBStrain00007373
WBStrain00007374
WBStrain00007375
WBStrain00007424
WBStrain00007425
WBStrain00007534
WBStrain00007560
WBStrain00007709
WBStrain00007859
WBStrain00007860
WBStrain00008302
WBStrain00008442
WBStrain00008448
WBStrain00008460
WBStrain00008471
WBStrain00008472
WBStrain00008479
WBStrain00008481
WBStrain00008484
WBStrain00008495
WBStrain00008499
WBStrain00008500
WBStrain00008502
WBStrain00022234
WBStrain00022582
WBStrain00022586
WBStrain00022587
WBStrain00022592
WBStrain00022595
WBStrain00022596
WBStrain00022599
WBStrain00022600
WBStrain00022604
WBStrain00022617
WBStrain00022630
WBStrain00022633
WBStrain00022638
WBStrain00022641
WBStrain00022644
WBStrain00022645
WBStrain00022649
WBStrain00022652
WBStrain00022653
WBStrain00022655
WBStrain00022663
WBStrain00022664
WBStrain00022688
WBStrain00022766
WBStrain00023466
WBStrain00023822
WBStrain00023901
WBStrain00023965
WBStrain00024047
WBStrain00024060
WBStrain00024066
WBStrain00024067
WBStrain00024152
WBStrain00024207
WBStrain00026345
WBStrain00027050
WBStrain00027141
WBStrain00027364
WBStrain00027385
WBStrain00027433
WBStrain00027452
WBStrain00027480
WBStrain00027511
WBStrain00027512
WBStrain00027513
WBStrain00027514
WBStrain00027515
WBStrain00027516
WBStrain00027526
WBStrain00027596
WBStrain00027614
WBStrain00027616
WBStrain00028690
WBStrain00028709
WBStrain00029064
WBStrain00029189
WBStrain00029266
WBStrain00029267
WBStrain00029269
WBStrain00029468
WBStrain00029502
WBStrain00029503
WBStrain00029531
WBStrain00030623
WBStrain00030628
WBStrain00030926
WBStrain00030965
WBStrain00031318
WBStrain00031321
WBStrain00031324
WBStrain00031327
WBStrain00031876
WBStrain00031890
WBStrain00031924
WBStrain00031929
WBStrain00031930
WBStrain00031934
WBStrain00031936
WBStrain00031960
WBStrain00031978
WBStrain00032032
WBStrain00034459
WBStrain00034682
WBStrain00034683
WBStrain00034684
WBStrain00034697
WBStrain00034698
WBStrain00034776
WBStrain00034777
WBStrain00035159
WBStrain00035160
WBStrain00035414
WBStrain00035415
WBStrain00035475
WBStrain00035691
WBStrain00035707
WBStrain00035727
WBStrain00035776
WBStrain00035782
WBStrain00035797
WBStrain00035815
WBStrain00035822
WBStrain00035830
WBStrain00035831
WBStrain00035840
WBStrain00035848
WBStrain00035863
WBStrain00035868
WBStrain00035869
WBStrain00035876
WBStrain00035877
WBStrain00035880
WBStrain00035884
WBStrain00035888
WBStrain00035899
WBStrain00035902
WBStrain00035903
WBStrain00035910
WBStrain00035918
WBStrain00035922
WBStrain00035935
WBStrain00035936
WBStrain00035937
WBStrain00035941
WBStrain00035951
WBStrain00035956
WBStrain00035958
WBStrain00035968
WBStrain00035976
WBStrain00035990
WBStrain00035996
WBStrain00036016
WBStrain00036018
WBStrain00036021
WBStrain00036037
WBStrain00036043
WBStrain00036044
WBStrain00036045
WBStrain00036051
WBStrain00036055
WBStrain00036084
WBStrain00036100
WBStrain00036101
WBStrain00036104
WBStrain00036117
WBStrain00036119
WBStrain00036137
WBStrain00036138
WBStrain00036141
WBStrain00036153
WBStrain00036159
WBStrain00036175
WBStrain00036176
WBStrain00036178
WBStrain00036188
WBStrain00036195
WBStrain00036197
WBStrain00036198
WBStrain00036204
WBStrain00036234
WBStrain00036243
WBStrain00036254
WBStrain00036265
WBStrain00036275
WBStrain00036280
WBStrain00036312
WBStrain00036319
WBStrain00036321
WBStrain00036356
WBStrain00036357
WBStrain00036372
WBStrain00036373
WBStrain00036376
WBStrain00036377
WBStrain00036383
WBStrain00036396
WBStrain00036402
WBStrain00036411
WBStrain00036421
WBStrain00036422
WBStrain00036443
WBStrain00036446
WBStrain00036448
WBStrain00036449
WBStrain00036474
WBStrain00036475
WBStrain00036500
WBStrain00036507
WBStrain00036516
WBStrain00036529
WBStrain00036530
WBStrain00036532
WBStrain00036536
WBStrain00036542
WBStrain00036543
WBStrain00036562
WBStrain00036564
WBStrain00036565
WBStrain00036569
WBStrain00036582
WBStrain00036586
WBStrain00036588
WBStrain00036592
WBStrain00036598
WBStrain00036599
WBStrain00036600
WBStrain00036614
WBStrain00036616
WBStrain00036624
WBStrain00036627
WBStrain00036640
WBStrain00036667
WBStrain00036670
WBStrain00036674
WBStrain00036684
WBStrain00036702
WBStrain00036732
WBStrain00036733
WBStrain00036742
WBStrain00036743
WBStrain00036752
WBStrain00036753
WBStrain00036755
WBStrain00036758
WBStrain00036788
WBStrain00036789
WBStrain00036809
WBStrain00036828
WBStrain00036829
WBStrain00036830
WBStrain00036837
WBStrain00036845
WBStrain00036864
WBStrain00036872
WBStrain00036903
WBStrain00036905
WBStrain00036908
WBStrain00036910
WBStrain00036912
WBStrain00036920
WBStrain00036921
WBStrain00036934
WBStrain00036938
WBStrain00036944
WBStrain00036945
WBStrain00036956
WBStrain00036961
WBStrain00036965
WBStrain00036974
WBStrain00036976
WBStrain00036983
WBStrain00036984
WBStrain00036985
WBStrain00036991
WBStrain00036995
WBStrain00036996
WBStrain00036998
WBStrain00037014
WBStrain00037018
WBStrain00037023
WBStrain00037027
WBStrain00037036
WBStrain00037037
WBStrain00037042
WBStrain00037056
WBStrain00037076
WBStrain00037079
WBStrain00037083
WBStrain00037084
WBStrain00037090
WBStrain00037128
WBStrain00037130
WBStrain00037146
WBStrain00037151
WBStrain00037160
WBStrain00037175
WBStrain00037180
WBStrain00037181
WBStrain00037182
WBStrain00037185
WBStrain00037191
WBStrain00037192
WBStrain00037194
WBStrain00037195
WBStrain00037196
WBStrain00037205
WBStrain00037206
WBStrain00037218
WBStrain00037222
WBStrain00037223
WBStrain00037224
WBStrain00037226
WBStrain00037232
WBStrain00037233
WBStrain00037234
WBStrain00037242
WBStrain00037243
WBStrain00037247
WBStrain00037248
WBStrain00037260
WBStrain00037261
WBStrain00037262
WBStrain00037280
WBStrain00037291
WBStrain00037296
WBStrain00037297
WBStrain00037310
WBStrain00037312
WBStrain00037313
WBStrain00037356
WBStrain00037362
WBStrain00037373
WBStrain00037374
WBStrain00037402
WBStrain00037409
WBStrain00037412
WBStrain00037454
WBStrain00037462
WBStrain00037469
WBStrain00037475
WBStrain00037482
WBStrain00037487
WBStrain00037506
WBStrain00037507
WBStrain00037509
WBStrain00037512
WBStrain00037514
WBStrain00037515
WBStrain00037543
WBStrain00037556
WBStrain00037557
WBStrain00037559
WBStrain00037603
WBStrain00037615
WBStrain00037698
WBStrain00037715
WBStrain00037717
WBStrain00037719
WBStrain00037754
WBStrain00037777
WBStrain00037779
WBStrain00037782
WBStrain00037785
WBStrain00037786
WBStrain00037788
WBStrain00037789
WBStrain00037790
WBStrain00037791
WBStrain00037796
WBStrain00037799
WBStrain00037801
WBStrain00037805
WBStrain00040372
WBStrain00040391
WBStrain00040392
WBStrain00040396
WBStrain00040397
WBStrain00040442
WBStrain00040443
WBStrain00040471
WBStrain00040472
WBStrain00040530
WBStrain00040667
WBStrain00040717
WBStrain00040718
WBStrain00040719
WBStrain00040720
WBStrain00040721
WBStrain00040722
WBStrain00040724
WBStrain00040878
WBStrain00047286
WBStrain00047323
WBStrain00047329
WBStrain00047474
WBStrain00048299
WBStrain00048301
WBStrain00048305
WBStrain00048309
WBStrain00049318
WBStrain00049329
WBStrain00051034
WBStrain00051036
WBStrain00051091
WBStrain00051769
WBStrain00051881
WBStrain00051898
WBStrain00051913
WBStrain00051914
WBStrain00051915
WBStrain00051916
WBStrain00051917
WBStrain00051918
WBStrain00051919
WBStrain00051920
WBStrain00051921
WBStrain00051922
WBStrain00051923
WBStrain00051924
WBStrain00051925
WBStrain00054544
WBStrain00054693
WBStrain00054701
WBStrain00054790
WBStrain00054795
WBStrain00054807
WBStrain00055401
WBStrain00055413
WBStrain00055419
WBStrain00055433
WBStrain00055506
WBStrain00055841
WBStrain00057341
LaboratoryCB
CA
UP
StatusLive
AffectsGeneWBGene00200715
WBGene00000254
Transcript (12)
InteractorWBInteraction000537297
GeneticsInterpolated_map_positionI1.02091
Mapping_dataIn_2_point260
261
262
5220
6170
6188
6193
6200
In_multi_point (15)
In_pos_neg_data509
4020
4026
4035
4040
4047
4054
4061
4065
5317
5360
6196
6313
6357
6373
6403
6432
6450
6465
6471
6478
6485
6490
6497
6505
6521
6527
6536
6550
6562
6594
6601
6606
6612
6624
6642
6658
Marked_rearrangementhT2[bli-4(e937) let-?(h661)]
hT2[bli-4(e937) let-?(q782) qIs48]
hT2[bli-4(e937) qIs48]
hT2[bli-4(e937) unc-29(h1011)]
hT2[bli-4(e937)]
DescriptionPhenotypeWBPhenotype:0000025Paper_evidenceWBPaper00001439
WBPaper00005747
Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPerson2987
Remarkadult blistered, especially head; penetrance 90%; unique Class I allele. Easy to score (ES3) in older adults.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
fully complemented by h754 and s90Paper_evidenceWBPaper00001439
Curator_confirmedWBPerson712
Table 1Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
PenetranceHigh90%Person_evidenceWBPerson261
Curator_confirmedWBPerson712
EQ_annotationsLife_stageWBls:0000041PATO:0000460Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Phenotype_assayGenotypekaIs12 [col-19::gfp]Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Ease_of_scoringES3_Easy_to_scorePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000351Paper_evidenceWBPaper00002829
Curator_confirmedWBPerson712
Remarkanimals arrest during hatchingPaper_evidenceWBPaper00002829
Curator_confirmedWBPerson712
RecessivePaper_evidenceWBPaper00002829
Curator_confirmedWBPerson712
Phenotype_assayGenotypedpy-5 unc-13; sDp2Paper_evidenceWBPaper00002829
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0000505Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
RemarkMales are not Ram.Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
EQ_annotationsAnatomy_termWBbt:0006941PATO:0000460Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
Life_stageWBls:0000056PATO:0000460Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
Phenotype_assayTemperature20CPaper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
Genotypehim-5(e1490)Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
WBPhenotype:0000961Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
RemarkTable 1Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Phenotype_assayGenotypekaIs12 [col-19::gfp]Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
WBPhenotype:0001412Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
RemarkTable 1Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Phenotype_assayGenotypekaIs12 [col-19::gfp]Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
WBPhenotype:0001517Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
RemarkTable 1Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Phenotype_assayGenotypekaIs12 [col-19::gfp]Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Reference (30)
Remarke937 is a 3325bp deletionPaper_evidenceWBPaper00028453
Allele sequenced by Andrew Chisholm
Variation stub/paper connection generated from the May 2021 NN VFP dataset.
Created by WBPerson51134 from the NN_VFP_triage_pipeline
MethodDeletion_allele