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WormBase Tree Display for Gene: WBGene00015828

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Name Class

WBGene00015828SMapS_parentSequenceC16C4
IdentityVersion2
NameCGC_namemath-14Person_evidenceWBPerson655
Sequence_nameC16C4.4
Molecular_nameC16C4.4a
C16C4.4a.1
CE08200
C16C4.4b
CE34692
C16C4.4b.1
Other_nameCELE_C16C4.4Accession_evidenceNDBBX284602
Public_namemath-14
DB_infoDatabaseAceViewgene2C135
WormQTLgeneWBGene00015828
WormFluxgeneWBGene00015828
NDBlocus_tagCELE_C16C4.4
PanthergeneCAEEL|WormBase=WBGene00015828|UniProtKB=F3NWW3
familyPTHR46308
NCBIgene182658
RefSeqproteinNM_001267115.3
NM_001267114.2
TREEFAMTREEFAM_IDTF322050
TrEMBLUniProtAccH2KYT1
F3NWW3
UniProt_GCRPUniProtAccF3NWW3
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
212 Dec 2005 17:54:47WBPerson2970Name_changeCGC_namemath-14
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmath
Allele (84)
RNASeq_FPKM (74)
Ortholog (18)
ParalogWBGene00015015Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015606Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00015608Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015609Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015827Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020360Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015836Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021772Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015832Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015834Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015835Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015837Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015838Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00022689Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00022690Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00022691Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WBGene00020080Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018100Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020359Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020358Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015829Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015839Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016720Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016719Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016718Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018662Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021193Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016556Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016555Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00016554Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00019135Caenorhabditis elegansFrom_analysisTreeFam
WBGene00020075Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00016544Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015833Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00018102Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020532Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00235354Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018663Caenorhabditis elegansFrom_analysisPanther
WBGene00018101Caenorhabditis elegansFrom_analysisPanther
WBGene00016717Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006464Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009135Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009137Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009247Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009945Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012195Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012196Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013569Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015012Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015014Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015590Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015591Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015595Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015798Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017405Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017450Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017452Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017460Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018223Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018249Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018442Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018452Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018665Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018667Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018668Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019132Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019138Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019139Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019140Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019141Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019421Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019699Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020073Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020325Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020326Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020329Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020859Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021725Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021726Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021853Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022396Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00023427Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044346Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00045036Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00305158Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Heme; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC16C4.4a
C16C4.4b
Corresponding_CDS_history (2)
Corresponding_transcriptC16C4.4a.1
C16C4.4b.1
Associated_featureWBsf220890
Experimental_infoRNAi_resultWBRNAi00010842Inferred_automaticallyRNAi_primary
WBRNAi00103193Inferred_automaticallyRNAi_primary
WBRNAi00040705Inferred_automaticallyRNAi_primary
WBRNAi00028959Inferred_automaticallyRNAi_primary
Expr_patternExpr1144747
Expr2031626
Drives_constructWBCnstr00028536
Construct_productWBCnstr00028536
Microarray_results (16)
Expression_cluster (214)
Interaction (14)
Map_infoMapIIPosition-14.2723Error0.002649
PositivePositive_cloneC16C4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00062345
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene