WormBase Tree Display for Gene: WBGene00018101
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| WBGene00018101 | SMap | S_parent | Sequence | F36H5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | math-27 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | F36H5.2 | |||||||||
| Molecular_name | F36H5.2 | |||||||||
| Other_name | CELE_F36H5.2 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | math-27 | |||||||||
| DB_info | Database | AceView | gene | 2C59 | ||||||
| WormQTL | gene | WBGene00018101 | ||||||||
| SignaLink | protein | WBGene00018101 | ||||||||
| WormFlux | gene | WBGene00018101 | ||||||||
| NDB | locus_tag | CELE_F36H5.2 | ||||||||
| NCBI | gene | 173545 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-27 | |||||
| 3 | 08 Feb 2019 14:12:55 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | math | |||||||||
| Allele (176) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00154588 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| Paralog (35) | ||||||||||
| Structured_description | Concise_description | The F36H5.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | ||||||
| Curator_confirmed | WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Enriched in AFD; OLL; PVD; head mesodermal cell; and intestine based on microarray and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by sixteen chemicals including rotenone; Cry5B; and levamisole based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F36H5.2:wp84 | ||||||||
| F36H5.2a:wp270 | ||||||||||
| F36H5.2b:wp231 | ||||||||||
| F36H5.2b:wp270 | ||||||||||
| F36H5.2c:wp270 | ||||||||||
| F36H5.2d:wp270 | ||||||||||
| Corresponding_pseudogene | F36H5.2 | |||||||||
| Associated_feature | WBsf986809 | |||||||||
| WBsf220874 | ||||||||||
| Experimental_info | Expr_pattern | Expr1037799 | ||||||||
| Expr1150433 | ||||||||||
| Expr2013403 | ||||||||||
| Expr2031637 | ||||||||||
| Drives_construct | WBCnstr00026778 | |||||||||
| Construct_product | WBCnstr00026778 | |||||||||
| Microarray_results (39) | ||||||||||
| Expression_cluster (190) | ||||||||||
| Interaction | WBInteraction000102994 | |||||||||
| WBInteraction000111941 | ||||||||||
| WBInteraction000251405 | ||||||||||
| WBInteraction000315069 | ||||||||||
| WBInteraction000328323 | ||||||||||
| WBInteraction000329585 | ||||||||||
| WBInteraction000352448 | ||||||||||
| WBInteraction000361545 | ||||||||||
| WBInteraction000376510 | ||||||||||
| Map_info | Map | II | Position | -14.4639 | Error | 0.004664 | ||||
| Positive | Positive_clone | F36H5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
