WormBase Tree Display for Gene: WBGene00018101
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WBGene00018101 | SMap | S_parent | Sequence | F36H5 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | ||||||||
Name | CGC_name | math-27 | Person_evidence | WBPerson655 | ||||||
Sequence_name | F36H5.2 | |||||||||
Molecular_name | F36H5.2 | |||||||||
Other_name | CELE_F36H5.2 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | math-27 | |||||||||
DB_info | Database | AceView | gene | 2C59 | ||||||
WormQTL | gene | WBGene00018101 | ||||||||
SignaLink | protein | WBGene00018101 | ||||||||
WormFlux | gene | WBGene00018101 | ||||||||
NDB | locus_tag | CELE_F36H5.2 | ||||||||
NCBI | gene | 173545 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-27 | |||||
3 | 08 Feb 2019 14:12:55 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Gene_class | math | |||||||||
Allele (176) | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog | WBGene00154588 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
Paralog (35) | ||||||||||
Structured_description | Concise_description | The F36H5.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | ||||||
Curator_confirmed | WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
Automated_description | Enriched in AFD; OLL; PVD; head mesodermal cell; and intestine based on microarray and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by sixteen chemicals including rotenone; Cry5B; and levamisole based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||||
Curator_confirmed (2) | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | F36H5.2:wp84 | ||||||||
F36H5.2a:wp270 | ||||||||||
F36H5.2b:wp231 | ||||||||||
F36H5.2b:wp270 | ||||||||||
F36H5.2c:wp270 | ||||||||||
F36H5.2d:wp270 | ||||||||||
Corresponding_pseudogene | F36H5.2 | |||||||||
Associated_feature | WBsf986809 | |||||||||
WBsf220874 | ||||||||||
Experimental_info | Expr_pattern | Expr1037799 | ||||||||
Expr1150433 | ||||||||||
Expr2013403 | ||||||||||
Expr2031637 | ||||||||||
Drives_construct | WBCnstr00026778 | |||||||||
Construct_product | WBCnstr00026778 | |||||||||
Microarray_results (39) | ||||||||||
Expression_cluster (190) | ||||||||||
Interaction | WBInteraction000102994 | |||||||||
WBInteraction000111941 | ||||||||||
WBInteraction000251405 | ||||||||||
WBInteraction000315069 | ||||||||||
WBInteraction000328323 | ||||||||||
WBInteraction000329585 | ||||||||||
WBInteraction000352448 | ||||||||||
WBInteraction000361545 | ||||||||||
WBInteraction000376510 | ||||||||||
Map_info | Map | II | Position | -14.4639 | Error | 0.004664 | ||||
Positive | Positive_clone | F36H5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |