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WormBase Tree Display for Gene: WBGene00015403

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Name Class

WBGene00015403SMapS_parentSequenceC03H5
IdentityVersion2
Name (5)
DB_infoDatabaseAceViewgene2A693
WormQTLgeneWBGene00015403
WormFluxgeneWBGene00015403
NDBlocus_tagCELE_C03H5.1
PanthergeneCAEEL|WormBase=WBGene00015403|UniProtKB=O16660
familyPTHR22991
NCBIgene173430
RefSeqproteinNM_061324.9
TREEFAMTREEFAM_IDTF351663
TrEMBLUniProtAccO16660
UniProt_GCRPUniProtAccO16660
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
229 Apr 2005 13:53:45WBPerson2970Name_changeCGC_nameclec-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (25)
RNASeq_FPKM (74)
Ortholog (49)
ParalogWBGene00007153Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008294Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00008477Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00008891Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009854Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009855Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009856Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009857Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009859Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009860Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010169Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010399Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011584Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00011852Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011853Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012022Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012023Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012024Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012025Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012103Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00012582Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00012583Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00013493Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00013607Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013608Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013609Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015198Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00017364Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00018105Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00020328Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00016450Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00016451Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00016577Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00044331Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00219321Caenorhabditis elegansFrom_analysisPanther
WBGene00020327Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044332Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019917Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019928Caenorhabditis elegansFrom_analysisPanther
WBGene00007152Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008593Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008594Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008595Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008596Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008597Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008879Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009291Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011222Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011668Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017199Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020220Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020221Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty-seven chemicals including Heme; tryptophan; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC03H5.1
Corresponding_CDS_historyC03H5.1:wp87
Corresponding_transcriptC03H5.1.1
Associated_featureWBsf717620
WBsf986401
WBsf986402
WBsf220754
WBsf220755
Experimental_infoRNAi_resultWBRNAi00039558Inferred_automaticallyRNAi_primary
WBRNAi00010082Inferred_automaticallyRNAi_primary
Expr_patternExpr1017137
Expr1143660
Expr2010054
Expr2028295
Drives_constructWBCnstr00028870
Construct_productWBCnstr00028870
Microarray_results (16)
Expression_cluster (285)
Interaction (48)
Map_infoMapIIPosition-15.6118Error0.001187
PositivePositive_cloneC03H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene