WormBase Tree Display for Gene: WBGene00007152
expand all nodes | collapse all nodes | view schema
| WBGene00007152 | SMap | S_parent | Sequence | B0365 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | clec-225 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | B0365.5 | ||||||||
| Molecular_name | B0365.5a | ||||||||
| B0365.5a.1 | |||||||||
| CE46505 | |||||||||
| B0365.5b | |||||||||
| CE46413 | |||||||||
| B0365.5b.1 | |||||||||
| Other_name | CELE_B0365.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-225 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00007152 | |||||
| WormFlux | gene | WBGene00007152 | |||||||
| NDB | locus_tag | CELE_B0365.5 | |||||||
| NCBI | gene | 181942 | |||||||
| RefSeq | protein | NM_001026179.5 | |||||||
| NM_001026178.6 | |||||||||
| TrEMBL | UniProtAcc | G3MU44 | |||||||
| P90733 | |||||||||
| UniProt_GCRP | UniProtAcc | P90733 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-225 | ||||
| 3 | 15 Aug 2011 09:51:05 | WBPerson4025 | Event | Split_into | WBGene00219208 | ||||
| Split_into | WBGene00219208 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (40) | |||||||||
| Paralog (71) | |||||||||
| Structured_description | Automated_description | Enriched in AFD; MC neuron; hypodermis; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and elt-2 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; methylmercury hydroxide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0365.5a | |||||||
| B0365.5b | |||||||||
| Corresponding_CDS_history | B0365.5:wp142 | ||||||||
| B0365.5a:wp227 | |||||||||
| B0365.5b:wp227 | |||||||||
| Corresponding_transcript | B0365.5a.1 | ||||||||
| B0365.5b.1 | |||||||||
| Other_sequence | MP00133 | ||||||||
| MPC00079_1 | |||||||||
| Associated_feature | WBsf653287 | ||||||||
| WBsf669558 | |||||||||
| WBsf669559 | |||||||||
| WBsf234773 | |||||||||
| WBsf234774 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009732 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1013895 | ||||||||
| Expr1143153 | |||||||||
| Expr2010131 | |||||||||
| Expr2028372 | |||||||||
| Drives_construct | WBCnstr00033960 | ||||||||
| Construct_product | WBCnstr00033960 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | V | Position | 4.94266 | Error | 0.002063 | |||
| Positive | Positive_clone | B0365 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
