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WormBase Tree Display for Gene: WBGene00007152

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Name Class

WBGene00007152SMapS_parentSequenceB0365
IdentityVersion3
NameCGC_nameclec-225Person_evidenceWBPerson2531
Sequence_nameB0365.5
Molecular_nameB0365.5a
B0365.5a.1
CE46505
B0365.5b
CE46413
B0365.5b.1
Other_nameCELE_B0365.5Accession_evidenceNDBBX284605
Public_nameclec-225
DB_infoDatabaseWormQTLgeneWBGene00007152
WormFluxgeneWBGene00007152
NDBlocus_tagCELE_B0365.5
NCBIgene181942
RefSeqproteinNM_001026179.5
NM_001026178.6
TrEMBLUniProtAccG3MU44
P90733
UniProt_GCRPUniProtAccP90733
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Oct 2007 15:40:27WBPerson2970Name_changeCGC_nameclec-225
315 Aug 2011 09:51:05WBPerson4025EventSplit_intoWBGene00219208
Split_intoWBGene00219208
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (17)
RNASeq_FPKM (74)
OrthologWBGene00058976Caenorhabditis remaneiFrom_analysisOMA
WBGene00031015Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WormBase-Compara
WBGene00144316Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146086Caenorhabditis brenneriFrom_analysisWormBase-Compara
CSP26.g1398Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g1399Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g1400Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5108Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5109Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15777Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g14228Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18067Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1853Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10477Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g21860Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21159Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g21160Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g21161Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_II.g8107Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g8108Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g8109Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g17082Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g17735Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g17737Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12971Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01096.g18361Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01096.g18362Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01096.g18363Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01096.g18364Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01298.g19950Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03317.g29789Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03855.g31444Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09082Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_12613Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017707Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g16180Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00060677Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00060994Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068476Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00259062Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (71)
Structured_descriptionAutomated_descriptionEnriched in AFD; MC neuron; hypodermis; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and elt-2 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; methylmercury hydroxide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0365.5a
B0365.5b
Corresponding_CDS_historyB0365.5:wp142
B0365.5a:wp227
B0365.5b:wp227
Corresponding_transcriptB0365.5a.1
B0365.5b.1
Other_sequenceMP00133
MPC00079_1
Associated_featureWBsf653287
WBsf669558
WBsf669559
WBsf234773
WBsf234774
Experimental_infoRNAi_resultWBRNAi00009732Inferred_automaticallyRNAi_primary
Expr_patternExpr1013895
Expr1143153
Expr2010131
Expr2028372
Drives_constructWBCnstr00033960
Construct_productWBCnstr00033960
Microarray_results (12)
Expression_cluster (123)
Interaction (20)
Map_infoMapVPosition4.94266Error0.002063
PositivePositive_cloneB0365Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene