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WormBase Tree Display for Gene: WBGene00008891

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Name Class

WBGene00008891SMapS_parentSequenceF16H6
IdentityVersion2
NameCGC_nameclec-42Person_evidenceWBPerson655
Sequence_nameF16H6.1
Molecular_nameF16H6.1
F16H6.1.1
CE18597
Other_nameCELE_F16H6.1Accession_evidenceNDBBX284605
Public_nameclec-42
DB_infoDatabaseAceViewgene5S673
WormQTLgeneWBGene00008891
WormFluxgeneWBGene00008891
NDBlocus_tagCELE_F16H6.1
PanthergeneCAEEL|WormBase=WBGene00008891|UniProtKB=Q9XV91
familyPTHR22991
NCBIgene180189
RefSeqproteinNM_075156.4
TREEFAMTREEFAM_IDTF351663
TrEMBLUniProtAccQ9XV91
UniProt_GCRPUniProtAccQ9XV91
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
229 Apr 2005 13:53:46WBPerson2970Name_changeCGC_nameclec-42
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (81)
RNASeq_FPKM (74)
Ortholog (78)
Paralog (52)
Structured_descriptionAutomated_descriptionExpressed in int1DL; int1DR; int1VL; int1VR; and neurons. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF16H6.1
Corresponding_transcriptF16H6.1.1
Associated_featureWBsf647675
WBsf1002843
WBsf1021424
WBsf233158
Experimental_infoRNAi_resultWBRNAi00031048Inferred_automaticallyRNAi_primary
WBRNAi00115655Inferred_automaticallyRNAi_primary
WBRNAi00044829Inferred_automaticallyRNAi_primary
WBRNAi00013428Inferred_automaticallyRNAi_primary
Expr_patternExpr3375
Expr15813
Expr15814
Expr1021726
Expr1148794
Expr2010175
Expr2028417
Drives_constructWBCnstr00011372
WBCnstr00032613
WBCnstr00042533
Construct_productWBCnstr00032613
Microarray_results (18)
Expression_cluster (224)
Interaction (43)
Map_infoMapVPosition14.7815Error0.044228
PositivePositive_cloneF16H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00026629
WBPaper00038491
WBPaper00057576
WBPaper00061178
WBPaper00061236
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene