WormBase Tree Display for Gene: WBGene00011852
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| WBGene00011852 | SMap | S_parent | Sequence | T20B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-26 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T20B3.12 | ||||||||
| Molecular_name | T20B3.12 | ||||||||
| T20B3.12.1 | |||||||||
| CE35619 | |||||||||
| Other_name | CELE_T20B3.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-26 | ||||||||
| DB_info | Database | AceView | gene | 5R329 | |||||
| WormQTL | gene | WBGene00011852 | |||||||
| WormFlux | gene | WBGene00011852 | |||||||
| NDB | locus_tag | CELE_T20B3.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011852|UniProtKB=Q9XUN6 | |||||||
| family | PTHR22991 | ||||||||
| NCBI | gene | 188626 | |||||||
| RefSeq | protein | NM_074853.4 | |||||||
| TREEFAM | TREEFAM_ID | TF351663 | |||||||
| TrEMBL | UniProtAcc | Q9XUN6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUN6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Apr 2005 13:53:45 | WBPerson2970 | Name_change | CGC_name | clec-26 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (144) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (41) | |||||||||
| Paralog (52) | |||||||||
| Structured_description | Automated_description | Enriched in RIH and intestine based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including rotenone; stavudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T20B3.12 | |||||||
| Corresponding_CDS_history | T20B3.12:wp109 | ||||||||
| Corresponding_transcript | T20B3.12.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00053593 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018883 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026246 | ||||||||
| Expr1157150 | |||||||||
| Expr2010159 | |||||||||
| Expr2028402 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction | WBInteraction000220912 | ||||||||
| WBInteraction000286453 | |||||||||
| WBInteraction000324447 | |||||||||
| WBInteraction000355767 | |||||||||
| WBInteraction000356331 | |||||||||
| WBInteraction000402851 | |||||||||
| WBInteraction000407300 | |||||||||
| WBInteraction000414476 | |||||||||
| WBInteraction000457144 | |||||||||
| Map_info | Map | V | Position | 11.2326 | Error | 0.000422 | |||
| Positive | Positive_clone | T20B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
