WormBase Tree Display for Gene: WBGene00011852
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| WBGene00011852 | SMap | S_parent | Sequence | T20B3 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | clec | ||||||
| Allele (144) | |||||||
| RNASeq_FPKM (74) | |||||||
| Ortholog (41) | |||||||
| Paralog (52) | |||||||
| Structured_description | Automated_description | Enriched in RIH and intestine based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including rotenone; stavudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | T20B3.12 | |||||
| Corresponding_CDS_history | T20B3.12:wp109 | ||||||
| Corresponding_transcript | T20B3.12.1 | ||||||
| Experimental_info | RNAi_result | WBRNAi00053593 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00018883 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1026246 | ||||||
| Expr1157150 | |||||||
| Expr2010159 | |||||||
| Expr2028402 | |||||||
| Microarray_results (14) | |||||||
| Expression_cluster (145) | |||||||
| Interaction | WBInteraction000220912 | ||||||
| WBInteraction000286453 | |||||||
| WBInteraction000324447 | |||||||
| WBInteraction000355767 | |||||||
| WBInteraction000356331 | |||||||
| WBInteraction000402851 | |||||||
| WBInteraction000407300 | |||||||
| WBInteraction000414476 | |||||||
| WBInteraction000457144 | |||||||
| Map_info | Map | V | Position | 11.2326 | Error | 0.000422 | |
| Positive | Positive_clone | T20B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference | WBPaper00038491 | ||||||
| WBPaper00055090 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
