WormBase Tree Display for Gene: WBGene00011668

WBGene00011668 SMap: S_parent: Sequence: T09F5
  Identity: Version: 2
    Name: CGC_name: clec-47 Person_evidence: WBPerson655
      Sequence_name: T09F5.9
      Molecular_name: T09F5.9
        T09F5.9.1
        CE13537
      Other_name: CELE_T09F5.9 Accession_evidence: NDB BX284605
      Public_name: clec-47
    DB_info: Database: AceView gene 5P657
        WormQTL gene WBGene00011668
        WormFlux gene WBGene00011668
        NDB locus_tag CELE_T09F5.9
        Panther gene CAEEL|WormBase=WBGene00011668|UniProtKB=O18076
          family PTHR22802
        NCBI gene 180025
        RefSeq protein NM_074343.7
        TrEMBL UniProtAcc O18076
        UniProt_GCRP UniProtAcc O18076
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Apr 2005 13:53:46 WBPerson2970 Name_change: CGC_name: clec-47
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele: WBVar02157478 Inferred_automatically: From strain object: PS8825
      WBVar02148071
      WBVar02146758
      WBVar01500212
      WBVar01500213
      WBVar01499299
      WBVar01072144
      WBVar01072145
      WBVar01072146
      WBVar01499316
    Strain: WBStrain00050973
    RNASeq_FPKM (74)
    GO_annotation: 00031367
      00031368
      00031369
      00106381
    Ortholog (29)
    Paralog (71)
    Structured_description: Concise_description: clec-47 encodes a C-type lectin; clec-47 expression is upregulated in response to stressors including ionizing radiation and bacterial infection. Paper_evidence: WBPaper00030985
            WBPaper00032454
          Curator_confirmed: WBPerson1843
          Date_last_updated: 29 Aug 2011 00:00:00
      Automated_description: Predicted to enable carbohydrate binding activity. Involved in response to gamma radiation. Predicted to be located in external side of plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T09F5.9
    Corresponding_transcript: T09F5.9.1
    Associated_feature: WBsf233005
  Experimental_info: RNAi_result: WBRNAi00052979 Inferred_automatically: RNAi_primary
      WBRNAi00018515 Inferred_automatically: RNAi_primary
      WBRNAi00035402 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023896
      Expr1156585
      Expr2010179
      Expr2028421
    Drives_construct: WBCnstr00030485
    Construct_product: WBCnstr00030485
    Microarray_results (17)
    Expression_cluster (337)
    Interaction: WBInteraction000502618
      WBInteraction000571194
  Map_info: Map: V Position: 7.48976
    Positive: Positive_clone: T09F5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene