WormBase Tree Display for Gene: WBGene00008594

WBGene00008594 SMap: S_parent: Sequence: F08H9
  Identity: Version: 2
    Name: CGC_name: clec-57 Person_evidence: WBPerson655
      Sequence_name: F08H9.6
      Molecular_name: F08H9.6
        F08H9.6.1
        CE31901
      Other_name: CELE_F08H9.6 Accession_evidence: NDB BX284605
      Public_name: clec-57
    DB_info: Database: AceView gene 5O951
        WormQTL gene WBGene00008594
        WormFlux gene WBGene00008594
        NDB locus_tag CELE_F08H9.6
        Panther gene CAEEL|WormBase=WBGene00008594|UniProtKB=Q19229
          family PTHR47761
        NCBI gene 179951
        RefSeq protein NM_074186.8
        TrEMBL UniProtAcc Q19229
        UniProt_GCRP UniProtAcc Q19229
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Apr 2005 13:53:46 WBPerson2970 Name_change: CGC_name: clec-57
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (55)
    RNASeq_FPKM (74)
    Ortholog (34)
    Paralog (52)
    Structured_description: Automated_description: Enriched in hyp3; intestine; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-six chemicals including tryptophan; D-glucopyranose; and D-glucose based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F08H9.6
    Corresponding_CDS_history: F08H9.6:wp87
    Corresponding_transcript: F08H9.6.1
    Other_sequence: CJC17096_1
    Associated_feature: WBsf647533
      WBsf662085
      WBsf1002027
      WBsf1002028
      WBsf1020848
      WBsf1020849
      WBsf232928
  Experimental_info: RNAi_result: WBRNAi00044063 Inferred_automatically: RNAi_primary
      WBRNAi00030679 Inferred_automatically: RNAi_primary
      WBRNAi00012938 Inferred_automatically: RNAi_primary
      WBRNAi00103254 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026768
      Expr1148030
      Expr2010190
      Expr2028432
    Drives_construct: WBCnstr00032845
    Construct_product: WBCnstr00032845
    Microarray_results (22)
    Expression_cluster (201)
    Interaction (54)
  Map_info: Map: V Position: 6.41641 Error: 0.00085
    Positive: Positive_clone: F08H9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene