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WormBase Tree Display for Gene: WBGene00020359

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Name Class

WBGene00020359SMapS_parentSequenceT08E11
IdentityVersion2
NameCGC_namemath-40Person_evidenceWBPerson655
Sequence_nameT08E11.3
Molecular_nameT08E11.3
T08E11.3.1
CE46633
Other_nameCELE_T08E11.3Accession_evidenceNDBBX284602
Public_namemath-40
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
212 Dec 2005 17:54:47WBPerson2970Name_changeCGC_namemath-40
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmath
Allele (79)
RNASeq_FPKM (74)
OrthologWBGene00154588Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WBGene00143314Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00070906Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00064233Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00070908Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00070910Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00060679Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085414Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00060680Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00084683Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00070029Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085418Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00057051Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00072684Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00060800Caenorhabditis remaneiFrom_analysisInparanoid_8
Csp11.Scaffold630.g19300Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19304Caenorhabditis tropicalisFrom_analysisWormBase-Compara
chrII_pilon.g3488Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00015015Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015606Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00015608Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015609Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015827Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015828Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015829Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015832Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015833Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00015834Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015835Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015836Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015837Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015838Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015839Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016544Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016554Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00016555Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00016556Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016717Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016718Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016719Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016720Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018100Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018101Caenorhabditis elegansFrom_analysisPanther
WBGene00018102Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018662Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00018663Caenorhabditis elegansFrom_analysisPanther
WBGene00019135Caenorhabditis elegansFrom_analysisTreeFam
WBGene00020075Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00020080Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020358Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020360Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00022691Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WBGene00022690Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020532Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00022689Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021193Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021772Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00235354Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006464Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009135Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009137Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009247Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009945Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012195Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012196Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013569Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015012Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015014Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015590Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015591Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015595Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015798Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017405Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017450Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017452Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017460Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018223Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018249Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018442Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018452Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018665Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018667Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018668Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019132Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019138Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019139Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019140Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019141Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019421Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019699Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020073Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020325Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020326Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020329Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020859Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021725Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021726Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021853Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022396Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00023427Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044346Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00045036Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00305158Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in FLP; GABAergic neurons; OLL; PVD; and intestine based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including D-glucopyranose; antimycin; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST08E11.3
Corresponding_CDS_historyT08E11.3:wp228
Corresponding_transcriptT08E11.3.1
Associated_featureWBsf220881
WBsf220882
Experimental_infoRNAi_resultWBRNAi00052873Inferred_automaticallyRNAi_primary
WBRNAi00018448Inferred_automaticallyRNAi_primary
WBRNAi00035356Inferred_automaticallyRNAi_primary
Expr_patternExpr1038868
Expr1156471
Expr2013413
Expr2031647
Microarray_results (12)
Expression_cluster (93)
InteractionWBInteraction000187445
WBInteraction000227007
WBInteraction000257219
WBInteraction000276315
WBInteraction000292739
WBInteraction000350884
Map_infoMapIIPosition-14.33Error0.003883
PositivePositive_cloneT08E11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene