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WormBase Tree Display for Gene: WBGene00016577

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Name Class

WBGene00016577SMapS_parentSequenceC41H7
IdentityVersion2
NameCGC_nameclec-3Person_evidenceWBPerson655
Sequence_nameC41H7.7
Molecular_nameC41H7.7
C41H7.7.1
CE32606
Other_nameCELE_C41H7.7Accession_evidenceNDBBX284602
Public_nameclec-3
DB_infoDatabaseAceViewgene2D308
WormQTLgeneWBGene00016577
WormFluxgeneWBGene00016577
NDBlocus_tagCELE_C41H7.7
PanthergeneCAEEL|WormBase=WBGene00016577|UniProtKB=O17155
familyPTHR22991
NCBIgene183396
RefSeqproteinNM_062025.3
TREEFAMTREEFAM_IDTF351663
TrEMBLUniProtAccO17155
UniProt_GCRPUniProtAccO17155
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
229 Apr 2005 13:53:45WBPerson2970Name_changeCGC_nameclec-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (54)
RNASeq_FPKM (74)
Ortholog (12)
ParalogWBGene00007153Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008294Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00008477Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00008891Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009854Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009855Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009856Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009857Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009859Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009860Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010169Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010399Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011584Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00011852Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011853Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012022Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012023Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012024Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012025Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012103Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00012582Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00012583Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00013493Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00013607Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013608Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013609Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015198Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015403Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00016450Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016451Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020220Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00017364Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018105Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020328Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020327Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044331Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044332Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019928Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00019917Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00219321Caenorhabditis elegansFrom_analysisPanther
WBGene00007152Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008593Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008594Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008595Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008596Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008597Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008879Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009291Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011222Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011668Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017199Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020221Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by forty chemicals including hydrogen sulfide; Ethanol; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC41H7.7
Corresponding_CDS_historyC41H7.7:wp90
Corresponding_transcriptC41H7.7.1
Associated_featureWBsf222818
Experimental_infoRNAi_resultWBRNAi00042327Inferred_automaticallyRNAi_primary
WBRNAi00029741Inferred_automaticallyRNAi_primary
WBRNAi00011856Inferred_automaticallyRNAi_primary
Expr_pattern (3)
Drives_constructWBCnstr00027967
Construct_productWBCnstr00027967
Microarray_results (20)
Expression_cluster (234)
InteractionWBInteraction000142642
WBInteraction000187436
WBInteraction000209090
WBInteraction000325236
WBInteraction000332998
WBInteraction000344054
WBInteraction000373834
WBInteraction000398074
WBInteraction000411983
WBInteraction000422456
Map_infoMapIIPosition-9.01504Error0.010602
PositivePositive_cloneC41H7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031002
WBPaper00031686
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene