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WormBase Tree Display for Gene: WBGene00008493

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Name Class

WBGene00008493SMapS_parentSequenceF01D5
IdentityVersion1
NameSequence_nameF01D5.2
Molecular_nameF01D5.2
F01D5.2.1
CE18560
Other_nameCELE_F01D5.2Accession_evidenceNDBBX284602
Public_nameF01D5.2
DB_infoDatabaseAceViewgene2O288
WormQTLgeneWBGene00008493
WormFluxgeneWBGene00008493
NDBlocus_tagCELE_F01D5.2
PanthergeneCAEEL|WormBase=WBGene00008493|UniProtKB=Q9XVB0
familyPTHR21724
NCBIgene184056
RefSeqproteinNM_064532.2
TREEFAMTREEFAM_IDTF318899
TrEMBLUniProtAccQ9XVB0
UniProt_GCRPUniProtAccQ9XVB0
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (13)
RNASeq_FPKM (74)
OrthologWBGene00124497Caenorhabditis japonicaFrom_analysisOMA
TreeFam
WBGene00039732Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00146112Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CSP40.g5614Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-F01D5.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19489Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00020.g1208Caenorhabditis sinicaFrom_analysisWormBase-Compara
chrII_pilon.g6465Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00092346Pristionchus pacificusFrom_analysisWormBase-Compara
ParalogWBGene00008483Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008492Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00016732Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008495Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015759Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00016733Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00016731Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008494Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00044315Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00012727Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00014057Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00044147Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00012729Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00010880Caenorhabditis elegansFrom_analysisTreeFam
WBGene00044317Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00018619Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00018616Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00018618Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015756Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008841Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008893Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009151Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009152Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009417Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009418Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009420Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009421Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009422Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009423Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009424Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010940Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011521Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012044Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013935Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013937Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013939Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013941Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013943Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00014037Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015398Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016781Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016782Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017200Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017203Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017204Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018303Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018643Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018646Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018647Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018713Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020237Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020239Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020240Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020241Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020242Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020243Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020244Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021612Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044316Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00045497Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty chemicals including rotenone; Tunicamycin; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF01D5.2
Corresponding_transcriptF01D5.2.1
Associated_featureWBsf990576
WBsf224235
Experimental_infoRNAi_resultWBRNAi00012725Inferred_automaticallyRNAi_primary
WBRNAi00103250Inferred_automaticallyRNAi_primary
WBRNAi00043728Inferred_automaticallyRNAi_primary
WBRNAi00030527Inferred_automaticallyRNAi_primary
Expr_patternExpr1015243
Expr1147714
Expr2002184
Expr2020405
Drives_constructWBCnstr00032926
Construct_productWBCnstr00032926
Microarray_results (19)
Expression_cluster (217)
InteractionWBInteraction000541045
Map_infoPositivePositive_cloneF01D5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII22.0376
MethodGene