WormBase Tree Display for Gene: WBGene00020237
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| WBGene00020237 | SMap | S_parent | Sequence | T05B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | phat-4 | Person_evidence | WBPerson980 | |||||
| WBPerson3905 | |||||||||
| Sequence_name | T05B4.3 | ||||||||
| Molecular_name | T05B4.3 | ||||||||
| T05B4.3.1 | |||||||||
| CE13197 | |||||||||
| Other_name | CEMSD85 | Paper_evidence | WBPaper00012240 | ||||||
| CELE_T05B4.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | phat-4 | ||||||||
| DB_info | Database | AceView | gene | 5E609 | |||||
| WormQTL | gene | WBGene00020237 | |||||||
| WormFlux | gene | WBGene00020237 | |||||||
| NDB | locus_tag | CELE_T05B4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020237|UniProtKB=O16424 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 178812 | |||||||
| RefSeq | protein | NM_071751.5 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | O16424 | |||||||
| UniProt_GCRP | UniProtAcc | O16424 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Feb 2006 09:28:57 | WBPerson2970 | Name_change | CGC_name | phat-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | phat | ||||||||
| Allele (81) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028013 | ||||||||
| Ortholog (18) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Involved in pharyngeal gland morphogenesis. Expressed in g1AL; g1AR; g1P; g2L; and g2R. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05B4.3 | |||||||
| Corresponding_transcript | T05B4.3.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf646740 | ||||||||
| WBsf231635 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052472 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018206 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035181 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10166 | ||||||||
| Expr1010340 | |||||||||
| Expr1038809 | |||||||||
| Expr1156097 | |||||||||
| Expr2014885 | |||||||||
| Expr2033120 | |||||||||
| Drives_construct | WBCnstr00025277 | ||||||||
| Construct_product | WBCnstr00025277 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (261) | |||||||||
| Interaction | WBInteraction000267413 | ||||||||
| WBInteraction000379212 | |||||||||
| WBInteraction000429574 | |||||||||
| WBInteraction000435752 | |||||||||
| WBInteraction000521572 | |||||||||
| Map_info | Map | V | Position | -6.45397 | Error | 0.010138 | |||
| Positive | Positive_clone | T05B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012240 | ||||||||
| WBPaper00032277 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
