WormBase Tree Display for Gene: WBGene00013935
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| WBGene00013935 | SMap | S_parent | Sequence | ZK218 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK218.1 | |||||||
| Molecular_name | ZK218.1 | ||||||||
| ZK218.1.1 | |||||||||
| CE16701 | |||||||||
| Other_name | CELE_ZK218.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ZK218.1 | ||||||||
| DB_info | Database | AceView | gene | 5R573 | |||||
| WormQTL | gene | WBGene00013935 | |||||||
| WormFlux | gene | WBGene00013935 | |||||||
| NDB | locus_tag | CELE_ZK218.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013935|UniProtKB=O45998 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 191243 | |||||||
| RefSeq | protein | NM_074928.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | O45998 | |||||||
| UniProt_GCRP | UniProtAcc | O45998 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (96) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Enriched in AVL; intestine; and pharyngeal-intestinal valve based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including let-60; rrf-3; and elt-2 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including aldicarb; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK218.1 | |||||||
| Corresponding_transcript | ZK218.1.1 | ||||||||
| Other_sequence | NB06463 | ||||||||
| NB06434 | |||||||||
| NB06956 | |||||||||
| NBC01491_1 | |||||||||
| NB06418 | |||||||||
| NBC08693_1 | |||||||||
| Associated_feature | WBsf1002597 | ||||||||
| WBsf233137 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059278 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038229 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024028 | ||||||||
| Expr1162708 | |||||||||
| Expr2008790 | |||||||||
| Expr2027025 | |||||||||
| Drives_construct | WBCnstr00029430 | ||||||||
| Construct_product | WBCnstr00029430 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction | WBInteraction000194556 | ||||||||
| WBInteraction000252024 | |||||||||
| WBInteraction000447596 | |||||||||
| Map_info | Positive | Positive_clone | ZK218 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 12.7512 | |||||||
| Method | Gene |
