WormBase Tree Display for Gene: WBGene00018713
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| WBGene00018713 | SMap | S_parent | Sequence | F52G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F52G3.5 | |||||||
| Molecular_name | F52G3.5 | ||||||||
| F52G3.5.1 | |||||||||
| CE35720 | |||||||||
| Other_name | CELE_F52G3.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F52G3.5 | ||||||||
| DB_info | Database | AceView | gene | XR588 | |||||
| WormQTL | gene | WBGene00018713 | |||||||
| WormFlux | gene | WBGene00018713 | |||||||
| NDB | locus_tag | CELE_F52G3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018713|UniProtKB=Q9GZH9 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 181742 | |||||||
| RefSeq | protein | NM_078344.7 | |||||||
| TREEFAM | TREEFAM_ID | TF321017 | |||||||
| TrEMBL | UniProtAcc | Q9GZH9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9GZH9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog (59) | |||||||||
| Structured_description | Automated_description | Enriched in arcade cell; mechanosensory neurons; and pharyngeal cell based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including multi-walled carbon nanotube; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like; ShKT domain; and Cysteine-rich repeat. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52G3.5 | |||||||
| Corresponding_CDS_history | F52G3.5:wp108 | ||||||||
| Corresponding_transcript | F52G3.5.1 | ||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032636 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015435 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002346 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048020 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019411 | ||||||||
| Expr1038056 | |||||||||
| Expr1151837 | |||||||||
| Expr2004007 | |||||||||
| Expr2022229 | |||||||||
| Drives_construct | WBCnstr00026322 | ||||||||
| Construct_product | WBCnstr00026322 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction | WBInteraction000252827 | ||||||||
| WBInteraction000321661 | |||||||||
| WBInteraction000348304 | |||||||||
| WBInteraction000353398 | |||||||||
| WBInteraction000408580 | |||||||||
| WBInteraction000412641 | |||||||||
| WBInteraction000431435 | |||||||||
| WBInteraction000444263 | |||||||||
| WBInteraction000445456 | |||||||||
| WBInteraction000460827 | |||||||||
| Map_info | Positive | Positive_clone | F52G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.0685 | |||||||
| Method | Gene |
