WormBase Tree Display for Gene: WBGene00020240
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| WBGene00020240 | SMap | S_parent | Sequence | T05B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05B4.9 | |||||||
| Molecular_name | T05B4.9 | ||||||||
| T05B4.9.1 | |||||||||
| CE13209 | |||||||||
| Other_name | CELE_T05B4.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T05B4.9 | ||||||||
| DB_info | Database | AceView | gene | 5E586 | |||||
| WormQTL | gene | WBGene00020240 | |||||||
| WormFlux | gene | WBGene00020240 | |||||||
| NDB | locus_tag | CELE_T05B4.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020240|UniProtKB=O16418 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 188105 | |||||||
| RefSeq | protein | NM_071745.1 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | O16418 | |||||||
| UniProt_GCRP | UniProtAcc | O16418 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (64) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (41) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Enriched in g1AL; g1AR; and g1P based on single-cell RNA-seq studies. Is affected by several genes including clk-1; lin-15B; and hpl-2 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Tunicamycin; multi-walled carbon nanotube; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05B4.9 | |||||||
| Corresponding_transcript | T05B4.9.1 | ||||||||
| Other_sequence | FG647766.1 | ||||||||
| Associated_feature | WBsf652558 | ||||||||
| WBsf233555 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052478 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035183 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018211 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1038811 | ||||||||
| Expr1156103 | |||||||||
| Expr2005860 | |||||||||
| Expr2024077 | |||||||||
| Drives_construct | WBCnstr00025275 | ||||||||
| Construct_product | WBCnstr00025275 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (60) | |||||||||
| Interaction | WBInteraction000136625 | ||||||||
| WBInteraction000252204 | |||||||||
| WBInteraction000280512 | |||||||||
| WBInteraction000304343 | |||||||||
| WBInteraction000340575 | |||||||||
| WBInteraction000361955 | |||||||||
| WBInteraction000371432 | |||||||||
| WBInteraction000430972 | |||||||||
| WBInteraction000438011 | |||||||||
| Map_info | Positive | Positive_clone | T05B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -6.47254 | |||||||
| Method | Gene |
