WormBase Tree Display for Gene: WBGene00018647
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| WBGene00018647 | SMap | S_parent | Sequence | F49F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F49F1.7 | |||||||
| Molecular_name | F49F1.7a | ||||||||
| F49F1.7a.1 | |||||||||
| CE17090 | |||||||||
| F49F1.7b | |||||||||
| CE53894 | |||||||||
| F49F1.7b.1 | |||||||||
| Other_name | CELE_F49F1.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F49F1.7 | ||||||||
| DB_info | Database | AceView | gene | 4E888 | |||||
| WormQTL | gene | WBGene00018647 | |||||||
| WormFlux | gene | WBGene00018647 | |||||||
| NDB | locus_tag | CELE_F49F1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018647|UniProtKB=Q9GZE2 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 177177 | |||||||
| RefSeq | protein | NM_001380179.1 | |||||||
| NM_068087.6 | |||||||||
| TrEMBL | UniProtAcc | U4PEN5 | |||||||
| Q9GZE2 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9GZE2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Enriched in ALN; accessory cell; arcade cell; and intestine based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-three chemicals including methylmercuric chloride; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49F1.7a | |||||||
| F49F1.7b | |||||||||
| Corresponding_CDS_history | F49F1.7b:wp274 | ||||||||
| Corresponding_transcript | F49F1.7a.1 | ||||||||
| F49F1.7b.1 | |||||||||
| Associated_feature | WBsf996182 | ||||||||
| WBsf996183 | |||||||||
| WBsf996184 | |||||||||
| WBsf1017189 | |||||||||
| WBsf1017190 | |||||||||
| WBsf229947 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015341 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047882 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032561 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013918 | ||||||||
| Expr1151713 | |||||||||
| Expr2003955 | |||||||||
| Expr2022177 | |||||||||
| Drives_construct | WBCnstr00026360 | ||||||||
| Construct_product | WBCnstr00026360 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (266) | |||||||||
| Interaction | WBInteraction000174857 | ||||||||
| WBInteraction000251213 | |||||||||
| WBInteraction000263837 | |||||||||
| WBInteraction000389482 | |||||||||
| WBInteraction000432359 | |||||||||
| Map_info | Positive | Positive_clone | F49F1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -0.667914 | |||||||
| Method | Gene |
