WormBase Tree Display for Gene: WBGene00016732
expand all nodes | collapse all nodes | view schema
| WBGene00016732 | SMap | S_parent | Sequence | C46H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | phat-1 | Person_evidence | WBPerson980 | |||||
| WBPerson3905 | |||||||||
| Sequence_name | C46H11.8 | ||||||||
| Molecular_name | C46H11.8 | ||||||||
| C46H11.8.1 | |||||||||
| CE34274 | |||||||||
| Other_name | CELE_C46H11.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | phat-1 | ||||||||
| DB_info | Database | AceView | gene | 1F612 | |||||
| WormQTL | gene | WBGene00016732 | |||||||
| WormFlux | gene | WBGene00016732 | |||||||
| NDB | locus_tag | CELE_C46H11.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016732|UniProtKB=Q9GYJ3 | |||||||
| family | PTHR46219 | ||||||||
| NCBI | gene | 172129 | |||||||
| RefSeq | protein | NM_059107.3 | |||||||
| TREEFAM | TREEFAM_ID | TF318899 | |||||||
| TrEMBL | UniProtAcc | Q9GYJ3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9GYJ3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Feb 2006 09:28:57 | WBPerson2970 | Name_change | CGC_name | phat-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | phat | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00092742 | ||||||||
| Ortholog (41) | |||||||||
| Paralog (61) | |||||||||
| Structured_description | Automated_description | Involved in pharyngeal gland morphogenesis. Expressed in pharyngeal gland cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C46H11.8 | |||||||
| Corresponding_CDS_history | C46H11.8:wp101 | ||||||||
| Corresponding_transcript | C46H11.8.1 | ||||||||
| Other_sequence | PT04027 | ||||||||
| Oden_isotig16180 | |||||||||
| DV019143.1 | |||||||||
| Tcir_isotig08744 | |||||||||
| DV019396.1 | |||||||||
| Name_isotig06303 | |||||||||
| PTC04675_1 | |||||||||
| FD516663.1 | |||||||||
| CSC00108_1 | |||||||||
| Associated_feature | WBsf047524 | ||||||||
| WBsf649133 | |||||||||
| WBsf219356 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042631 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003171 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029882 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8574 | ||||||||
| Expr10163 | |||||||||
| Expr1023120 | |||||||||
| Expr1037183 | |||||||||
| Expr1146615 | |||||||||
| Expr2014882 | |||||||||
| Expr2033117 | |||||||||
| Drives_construct | WBCnstr00005327 | ||||||||
| WBCnstr00013372 | |||||||||
| WBCnstr00014757 | |||||||||
| WBCnstr00017920 | |||||||||
| WBCnstr00018257 | |||||||||
| WBCnstr00018269 | |||||||||
| WBCnstr00027846 | |||||||||
| Construct_product | WBCnstr00027846 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (108) | |||||||||
| Map_info | Map | I | Position | -0.423078 | Error | 0.000245 | |||
| Positive | Positive_clone | C46H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032277 | ||||||||
| WBPaper00036955 | |||||||||
| WBPaper00038636 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
