WormBase Tree Display for Gene: WBGene00016732

WBGene00016732 SMap: S_parent: Sequence: C46H11
  Identity: Version: 2
    Name: CGC_name: phat-1 Person_evidence: WBPerson980
            WBPerson3905
      Sequence_name: C46H11.8
      Molecular_name: C46H11.8
        C46H11.8.1
        CE34274
      Other_name: CELE_C46H11.8 Accession_evidence: NDB BX284601
      Public_name: phat-1
    DB_info: Database: AceView gene 1F612
        WormQTL gene WBGene00016732
        WormFlux gene WBGene00016732
        NDB locus_tag CELE_C46H11.8
        Panther gene CAEEL|WormBase=WBGene00016732|UniProtKB=Q9GYJ3
          family PTHR46219
        NCBI gene 172129
        RefSeq protein NM_059107.3
        TREEFAM TREEFAM_ID TF318899
        TrEMBL UniProtAcc Q9GYJ3
        UniProt_GCRP UniProtAcc Q9GYJ3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 02 Feb 2006 09:28:57 WBPerson2970 Name_change: CGC_name: phat-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: phat
    Allele (25)
    RNASeq_FPKM (74)
    GO_annotation: 00092742
    Ortholog: WBGene00069418 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129434 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00158134 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151422 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00270412 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP21.g14885 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g2570 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g7198 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g7223 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g11876 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13110 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10675 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8425 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15377 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11692 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g2540 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15281 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17913 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00175.g6255 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g1644 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9749 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01146.g18750 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12361 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000314 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g21401 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10256310 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g829 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00095435 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095662 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100517 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114148 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116099 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277647 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278262 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278670 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278672 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278710 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280387 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281112 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281122 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281124 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (61)
    Structured_description: Automated_description: Involved in pharyngeal gland morphogenesis. Expressed in pharyngeal gland cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C46H11.8
    Corresponding_CDS_history: C46H11.8:wp101
    Corresponding_transcript: C46H11.8.1
    Other_sequence: PT04027
      Oden_isotig16180
      DV019143.1
      Tcir_isotig08744
      DV019396.1
      Name_isotig06303
      PTC04675_1
      FD516663.1
      CSC00108_1
    Associated_feature: WBsf047524
      WBsf649133
      WBsf219356
  Experimental_info: RNAi_result: WBRNAi00042631 Inferred_automatically: RNAi_primary
      WBRNAi00003171 Inferred_automatically: RNAi_primary
      WBRNAi00029882 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8574
      Expr10163
      Expr1023120
      Expr1037183
      Expr1146615
      Expr2014882
      Expr2033117
    Drives_construct: WBCnstr00005327
      WBCnstr00013372
      WBCnstr00014757
      WBCnstr00017920
      WBCnstr00018257
      WBCnstr00018269
      WBCnstr00027846
    Construct_product: WBCnstr00027846
    Microarray_results (17)
    Expression_cluster (145)
    Interaction (108)
  Map_info: Map: I Position: -0.423078 Error: 0.000245
    Positive: Positive_clone: C46H11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00032277
    WBPaper00036955
    WBPaper00038636
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene