WormBase Tree Display for Gene: WBGene00129434

WBGene00129434 SMap: S_parent: Sequence: Cjap.Contig18127
  Identity: Version: 3
    Name: CGC_name: Cjp-phat-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA10230
      Molecular_name: CJA10230
        CJA10230.1
        JA13196
      Public_name: Cjp-phat-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cjp-phat-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: phat
    RNASeq_FPKM: WBls:0000004 0.215551 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0.847742 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0.412246 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        0.678883 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        0.94552 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.886553 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        0.964968 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        1.21316 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.48138 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        2.30429 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        2.76661 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        3.1272 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        3.42928 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        5.4818 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        5.54857 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
      WBls:0000101 0.964968 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        1.88877 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (44)
    Paralog (26)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Is an ortholog of C. elegans phat-1. In C. elegans, phat-1 is involved in pharyngeal gland morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA10230
    Corresponding_transcript: CJA10230.1
    Other_sequence (61)
  Experimental_info: Expr_pattern: Expr1090353
    Microarray_results: GPL14145_CJA10230_499-558_0.832_3_C
      GPL14145_CJA10230_503-562_0.847_1_A
      GPL14145_CJA10230_514-573_0.834_2_B
  Method: Gene