WormBase Tree Display for Gene: WBGene00020243
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WBGene00020243 | SMap | S_parent | Sequence | T05B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T05B4.12 | |||||||
Molecular_name | T05B4.12 | ||||||||
T05B4.12.1 | |||||||||
CE13215 | |||||||||
T05B4.12.2 | |||||||||
Other_name | CELE_T05B4.12 | Accession_evidence | NDB | BX284605 | |||||
Public_name | T05B4.12 | ||||||||
DB_info | Database | AceView | gene | 5E602 | |||||
WormQTL | gene | WBGene00020243 | |||||||
WormFlux | gene | WBGene00020243 | |||||||
NDB | locus_tag | CELE_T05B4.12 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020243|UniProtKB=O16421 | |||||||
family | PTHR21724 | ||||||||
NCBI | gene | 188107 | |||||||
RefSeq | protein | NM_071748.2 | |||||||
TREEFAM | TREEFAM_ID | TF317956 | |||||||
TrEMBL | UniProtAcc | O16421 | |||||||
UniProt_GCRP | UniProtAcc | O16421 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (122) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (23) | |||||||||
Paralog (63) | |||||||||
Structured_description | Automated_description | Enriched in cephalic sheath cell; dopaminergic neurons; g1P; and pharynx based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and lin-29 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including hydrogen sulfide; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T05B4.12 | |||||||
Corresponding_transcript | T05B4.12.1 | ||||||||
T05B4.12.2 | |||||||||
Other_sequence | FD517419.1 | ||||||||
CSC01838_1 | |||||||||
Experimental_info | RNAi_result | WBRNAi00018203 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052469 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018204 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021496 | ||||||||
Expr1156093 | |||||||||
Expr2005856 | |||||||||
Expr2024073 | |||||||||
Drives_construct | WBCnstr00025272 | ||||||||
Construct_product | WBCnstr00025272 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (65) | |||||||||
Interaction | WBInteraction000402425 | ||||||||
Map_info | Positive | Positive_clone | T05B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | -6.46266 | |||||||
Reference | WBPaper00032277 | ||||||||
Method | Gene |