WormBase Tree Display for Gene: WBGene00020243
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| WBGene00020243 | SMap | S_parent | Sequence | T05B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05B4.12 | |||||||
| Molecular_name | T05B4.12 | ||||||||
| T05B4.12.1 | |||||||||
| CE13215 | |||||||||
| T05B4.12.2 | |||||||||
| Other_name | CELE_T05B4.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T05B4.12 | ||||||||
| DB_info | Database | AceView | gene | 5E602 | |||||
| WormQTL | gene | WBGene00020243 | |||||||
| WormFlux | gene | WBGene00020243 | |||||||
| NDB | locus_tag | CELE_T05B4.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020243|UniProtKB=O16421 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 188107 | |||||||
| RefSeq | protein | NM_071748.2 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | O16421 | |||||||
| UniProt_GCRP | UniProtAcc | O16421 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (122) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Enriched in cephalic sheath cell; dopaminergic neurons; g1P; and pharynx based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and lin-29 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including hydrogen sulfide; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05B4.12 | |||||||
| Corresponding_transcript | T05B4.12.1 | ||||||||
| T05B4.12.2 | |||||||||
| Other_sequence | FD517419.1 | ||||||||
| CSC01838_1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018203 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052469 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018204 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021496 | ||||||||
| Expr1156093 | |||||||||
| Expr2005856 | |||||||||
| Expr2024073 | |||||||||
| Drives_construct | WBCnstr00025272 | ||||||||
| Construct_product | WBCnstr00025272 | ||||||||
| Microarray_results | SMD_T05B4.12 | ||||||||
| SMD_T05B4.13 | |||||||||
| 186046_at | |||||||||
| A_12_P104970 | |||||||||
| Aff_T05B4.12 | |||||||||
| GPL13394_WBGene00020243 | |||||||||
| GPL13914_T05B4.12 | |||||||||
| GPL14144_T05B4.12_535-594_0.932_7_A | |||||||||
| GPL19516_CGZ0033332 | |||||||||
| GPL21109_T05B4.12 | |||||||||
| GPL3518_CE13215 | |||||||||
| GPL8304_CE_WBGene00020243_A | |||||||||
| GPL8673_T05B4_12P00092 | |||||||||
| GPL8673_T05B4_12P00583 | |||||||||
| GPL8673_T05B4_12P00600 | |||||||||
| GPL9450_T05B4.12 | |||||||||
| cea2.i.58956 | |||||||||
| Expression_cluster (65) | |||||||||
| Interaction | WBInteraction000402425 | ||||||||
| Map_info | Positive | Positive_clone | T05B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -6.46266 | |||||||
| Reference | WBPaper00032277 | ||||||||
| Method | Gene |
