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WormBase Tree Display for Gene: WBGene00018616

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Name Class

WBGene00018616SMapS_parentSequenceF48G7
IdentityVersion1
NameSequence_nameF48G7.5
Molecular_nameF48G7.5
F48G7.5.1
CE48243
Other_nameCELE_F48G7.5Accession_evidenceNDBBX284605
Public_nameF48G7.5
DB_infoDatabaseAceViewgene5B100
WormQTLgeneWBGene00018616
WormFluxgeneWBGene00018616
NDBlocus_tagCELE_F48G7.5
PanthergeneCAEEL|WormBase=WBGene00018616|UniProtKB=O44585
familyPTHR46219
NCBIgene178578
RefSeqproteinNM_070866.6
TREEFAMTREEFAM_IDTF318899
TrEMBLUniProtAccO44585
UniProt_GCRPUniProtAccO44585
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (62)
RNASeq_FPKM (74)
Ortholog (24)
Paralog (61)
Structured_descriptionAutomated_descriptionEnriched in head mesodermal cell and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-nine chemicals including Heme; 1-methylnicotinamide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShKT domain and ShK domain-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSF48G7.5
Corresponding_CDS_historyF48G7.5:wp237
Corresponding_transcriptF48G7.5.1
Other_sequenceOden_isotig07065
Oden_isotig07064
Oden_isotig07063
Hbac_isotig03427
FG975892.1
Oden_isotig07070
Oden_isotig07067
Oden_isotig07068
Oden_isotig07066
Oden_isotig07069
Associated_featureWBsf652447
WBsf233276
WBsf233277
Experimental_infoRNAi_resultWBRNAi00114465Inferred_automaticallyRNAi_primary
WBRNAi00000400Inferred_automaticallyRNAi_primary
WBRNAi00047776Inferred_automaticallyRNAi_primary
WBRNAi00015272Inferred_automaticallyRNAi_primary
WBRNAi00085725Inferred_automaticallyRNAi_primary
Expr_patternExpr1022097
Expr1151610
Expr2003899
Expr2022122
Drives_constructWBCnstr00026381
Construct_productWBCnstr00026381
Microarray_results (13)
Expression_cluster (214)
InteractionWBInteraction000101507
WBInteraction000150308
WBInteraction000261936
WBInteraction000345232
WBInteraction000364149
WBInteraction000419660
WBInteraction000424657
WBInteraction000427655
WBInteraction000450761
WBInteraction000456069
Map_infoPositivePositive_cloneF48G7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-19.9731
MethodGene