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WormBase Tree Display for Gene: WBGene00007262

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Name Class

WBGene00007262SMapS_parentSequenceC02D4
IdentityVersion3
NameCGC_namejud-4Paper_evidenceWBPaper00031371
Person_evidenceWBPerson360
Sequence_nameC02D4.1
Molecular_nameC02D4.1
C02D4.1.1
CE44488
Other_nameCELE_C02D4.1Accession_evidenceNDBBX284606
Public_namejud-4
DB_infoDatabaseAceViewgeneXP903
WormQTLgeneWBGene00007262
WormFluxgeneWBGene00007262
NDBlocus_tagCELE_C02D4.1
PanthergeneCAEEL|WormBase=WBGene00007262|UniProtKB=Q6LA91
familyPTHR21593
NCBIgene182109
RefSeqproteinNM_078133.6
TREEFAMTREEFAM_IDTF316270
TrEMBLUniProtAccQ6LA91
UniProt_GCRPUniProtAccQ6LA91
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
215 Jan 2008 10:52:23WBPerson2970Name_changeCGC_namejud-4
301 Nov 2011 16:29:25WBPerson2970EventAcquires_mergeWBGene00077533
Acquires_mergeWBGene00077533
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classjud
Allele (43)
RNASeq_FPKM (74)
Ortholog (25)
ParalogWBGene00003879Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00004144Caenorhabditis elegansFrom_analysisPanther
WBGene00004176Caenorhabditis elegansFrom_analysisPanther
WBGene00004177Caenorhabditis elegansFrom_analysisPanther
WBGene00014173Caenorhabditis elegansFrom_analysisPanther
WBGene00020550Caenorhabditis elegansFrom_analysisPanther
WBGene00014006Caenorhabditis elegansFrom_analysisPanther
WBGene00015514Caenorhabditis elegansFrom_analysisPanther
WBGene00016594Caenorhabditis elegansFrom_analysisPanther
WBGene00007868Caenorhabditis elegansFrom_analysisPanther
WBGene00019486Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00019021Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00009573Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00009356Caenorhabditis elegansFrom_analysisPanther
WBGene00022287Caenorhabditis elegansFrom_analysisPanther
WBGene00045207Caenorhabditis elegansFrom_analysisPanther
WBGene00010886Caenorhabditis elegansFrom_analysisPanther
WBGene00014090Caenorhabditis elegansFrom_analysisPanther
WBGene00013328Caenorhabditis elegansFrom_analysisPanther
WBGene00007869Caenorhabditis elegansFrom_analysisPanther
WBGene00007871Caenorhabditis elegansFrom_analysisPanther
WBGene00010885Caenorhabditis elegansFrom_analysisPanther
WBGene00016179Caenorhabditis elegansFrom_analysisPanther
WBGene00044009Caenorhabditis elegansFrom_analysisPanther
WBGene00022553Caenorhabditis elegansFrom_analysisPanther
WBGene00020014Caenorhabditis elegansFrom_analysisPanther
WBGene00011961Caenorhabditis elegansFrom_analysisPanther
WBGene00011484Caenorhabditis elegansFrom_analysisPanther
WBGene00008717Caenorhabditis elegansFrom_analysisPanther
WBGene00019065Caenorhabditis elegansFrom_analysisPanther
WBGene00235327Caenorhabditis elegansFrom_analysisPanther
WBGene00008716Caenorhabditis elegansFrom_analysisPanther
WBGene00044399Caenorhabditis elegansFrom_analysisPanther
WBGene00008753Caenorhabditis elegansFrom_analysisPanther
WBGene00014091Caenorhabditis elegansFrom_analysisPanther
WBGene00016180Caenorhabditis elegansFrom_analysisPanther
WBGene00013459Caenorhabditis elegansFrom_analysisPanther
WBGene00008757Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionjud-4 encodes an unfamiliar protein, putatively secreted, that isrequired both for normal sensitivity to ethanol and for survival afterfreezing and thawing; JUD-4 is expressed in hypodermis and vulvalmuscles; JUD-4 is orthologous to Brugia malayi Bm1_40315, but lacksobvious orthologies to non-nematode proteins; JUD-4's C-terminal domainhas possible similarity to F40E10.5, and to proteins such as human HOMER1; jud-4(ys18) mutants show delayed sensitivity to ethanol levelsthat rapidly paralyze normal worms, but do not survive freezing andrethawing as does wild-type; JUD-4 has no obvious function in mass RNAi assays.Paper_evidenceWBPaper00031371
Curator_confirmedWBPerson567
Date_last_updated04 Feb 2008 00:00:00
Automated_descriptionExpressed in hypodermis and vulval muscle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC02D4.1
Corresponding_CDS_historyC02D4.1:wp179
C02D4.1:wp211
Corresponding_transcriptC02D4.1.1
Other_sequenceCJC12505_1
Acan_isotig16488
Associated_featureWBsf648791
WBsf648792
WBsf648793
WBsf663626
WBsf1008162
WBsf236757
Experimental_infoRNAi_resultWBRNAi00039410Inferred_automaticallyRNAi_primary
WBRNAi00009984Inferred_automaticallyRNAi_primary
Expr_patternExpr7885
Expr1028098
Expr1143526
Expr2012897
Expr2031131
Drives_constructWBCnstr00012968
WBCnstr00033875
Construct_productWBCnstr00012968
WBCnstr00033875
Microarray_results (23)
Expression_cluster (157)
InteractionWBInteraction000292619
WBInteraction000300241
WBInteraction000365446
Map_infoMapXPosition22.331Error0.007282
PositivePositive_cloneC02D4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataPos_neg_data10902
10903
10904
ReferenceWBPaper00031371
WBPaper00033519
WBPaper00037313
RemarkWBGene00077533 created in error and merged into this gene.Curator_confirmedWBPerson2970
MethodGene