WormBase Tree Display for Gene: WBGene00007868
expand all nodes | collapse all nodes | view schema
WBGene00007868 | SMap | S_parent | Sequence | C32H11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | srlf-4 | Person_evidence | WBPerson260 | |||||
Laboratory_evidence | OH | ||||||||
Sequence_name | C32H11.5 | ||||||||
Molecular_name | C32H11.5 | ||||||||
C32H11.5.1 | |||||||||
CE19712 | |||||||||
Other_name | C32H11.5 | ||||||||
CELE_C32H11.5 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | srlf-4 | ||||||||
DB_info | Database | AceView | gene | 4N688 | |||||
WormQTL | gene | WBGene00007868 | |||||||
WormFlux | gene | WBGene00007868 | |||||||
NDB | locus_tag | CELE_C32H11.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007868|UniProtKB=Q9XUH6 | |||||||
family | PTHR21593 | ||||||||
NCBI | gene | 183129 | |||||||
RefSeq | protein | NM_070066.6 | |||||||
TREEFAM | TREEFAM_ID | TF319454 | |||||||
TrEMBL | UniProtAcc | Q9XUH6 | |||||||
UniProt_GCRP | UniProtAcc | Q9XUH6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-4 | ||||
Other_name | C32H11.5 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srlf | ||||||||
Allele (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00101771 | ||||||||
00101772 | |||||||||
Ortholog (16) | |||||||||
Paralog (39) | |||||||||
Structured_description | Automated_description | Enriched in GABAergic neurons; pharynx; and touch receptor neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including 1-methylnicotinamide; nicotinic acid; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C32H11.5 | |||||||
Corresponding_transcript | C32H11.5.1 | ||||||||
Associated_feature | WBsf652315 | ||||||||
WBsf231069 | |||||||||
WBsf231070 | |||||||||
Experimental_info | RNAi_result | WBRNAi00029435 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011493 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041712 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00065317 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080819 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014518 | ||||||||
Expr1145731 | |||||||||
Expr2001324 | |||||||||
Expr2019547 | |||||||||
Drives_construct | WBCnstr00033423 | ||||||||
Construct_product | WBCnstr00033423 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (168) | |||||||||
Interaction (176) | |||||||||
Map_info | Positive | Positive_clone | C32H11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 6.48368 | |||||||
Reference | WBPaper00033162 | ||||||||
Method | Gene |