WormBase Tree Display for Gene: WBGene00019065
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| WBGene00019065 | SMap | S_parent | Sequence | F58G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srlf-16 | Person_evidence | WBPerson260 | |||||
| Laboratory_evidence | OH | ||||||||
| Sequence_name | F58G4.3 | ||||||||
| Molecular_name | F58G4.3 | ||||||||
| F58G4.3.1 | |||||||||
| CE07308 | |||||||||
| Other_name | F58G4.3 | ||||||||
| CELE_F58G4.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srlf-16 | ||||||||
| DB_info | Database | AceView | gene | 5I579 | |||||
| WormQTL | gene | WBGene00019065 | |||||||
| WormFlux | gene | WBGene00019065 | |||||||
| NDB | locus_tag | CELE_F58G4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019065|UniProtKB=Q20998 | |||||||
| family | PTHR21593 | ||||||||
| NCBI | gene | 186543 | |||||||
| RefSeq | protein | NM_072692.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322730 | |||||||
| TrEMBL | UniProtAcc | Q20998 | |||||||
| UniProt_GCRP | UniProtAcc | Q20998 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-16 | ||||
| Other_name | F58G4.3 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srlf | ||||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (33) | |||||||||
| Paralog (42) | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by rsr-2 based on tiling array studies. Is affected by Atrazine; Chlorpyrifos; and Diazinon based on microarray studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58G4.3 | |||||||
| Corresponding_transcript | F58G4.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00016013 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049051 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017895 | ||||||||
| Expr1152792 | |||||||||
| Drives_construct | WBCnstr00026088 | ||||||||
| Construct_product | WBCnstr00026088 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster | WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray | ||||||||
| WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray | |||||||||
| WBPaper00061527:srj-42-srw-113 | |||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| WBPaper00036123:Atrazine_regulated | |||||||||
| WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated | |||||||||
| Interaction (71) | |||||||||
| Map_info | Positive | Positive_clone | F58G4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.01197 | |||||||
| Method | Gene |
