WormBase Tree Display for Gene: WBGene00008716
expand all nodes | collapse all nodes | view schema
WBGene00008716 | SMap | S_parent | Sequence | F11F1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | srlf-9 | Person_evidence | WBPerson260 | |||||
Laboratory_evidence | OH | ||||||||
Sequence_name | F11F1.4 | ||||||||
Molecular_name | F11F1.4 | ||||||||
F11F1.4.1 | |||||||||
CE15804 | |||||||||
Other_name | F11F1.4 | ||||||||
CELE_F11F1.4 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | srlf-9 | ||||||||
DB_info | Database | AceView | gene | 3O490 | |||||
WormQTL | gene | WBGene00008716 | |||||||
WormFlux | gene | WBGene00008716 | |||||||
NDB | locus_tag | CELE_F11F1.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008716|UniProtKB=Q9XVQ6 | |||||||
family | PTHR21593 | ||||||||
NCBI | gene | 184360 | |||||||
RefSeq | protein | NM_067363.1 | |||||||
TREEFAM | TREEFAM_ID | TF322730 | |||||||
TrEMBL | UniProtAcc | Q9XVQ6 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVQ6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-9 | ||||
Other_name | F11F1.4 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srlf | ||||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (35) | |||||||||
Paralog (42) | |||||||||
Structured_description | Automated_description | Enriched in DA neuron; dopaminergic neurons; and lateral ganglion based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; sir-2.1; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including metformin; Sirolimus; and Chlorpyrifos based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F11F1.4 | |||||||
Corresponding_transcript | F11F1.4.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00007129 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006107 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044400 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044399 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013141 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012591 | ||||||||
Expr1148347 | |||||||||
Expr2002461 | |||||||||
Expr2020677 | |||||||||
Drives_construct | WBCnstr00032749 | ||||||||
Construct_product | WBCnstr00032749 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (44) | |||||||||
Interaction (94) | |||||||||
Map_info | Positive | Positive_clone | F11F1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 21.2131 | |||||||
Method | Gene |