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WormBase Tree Display for Gene: WBGene00016179

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Name Class

WBGene00016179SMapS_parentSequenceC28C12
IdentityVersion2
NameCGC_namesrlf-2Person_evidenceWBPerson260
Laboratory_evidenceOH
Sequence_nameC28C12.3
Molecular_nameC28C12.3
C28C12.3.1
CE04110
Other_nameC28C12.3
CELE_C28C12.3Accession_evidenceNDBBX284604
Public_namesrlf-2
DB_infoDatabaseAceViewgene4J253
WormQTLgeneWBGene00016179
WormFluxgeneWBGene00016179
NDBlocus_tagCELE_C28C12.3
PanthergeneCAEEL|WormBase=WBGene00016179|UniProtKB=P50437
familyPTHR21593
NCBIgene182977
RefSeqproteinNM_069048.2
SwissProtUniProtAccP50437
TREEFAMTREEFAM_IDTF316074
UniProt_GCRPUniProtAccP50437
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
203 Oct 2022 15:59:20WBPerson21950Name_changeCGC_namesrlf-2
Other_nameC28C12.3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrlf
Allele (20)
RNASeq_FPKM (74)
Ortholog (24)
Paralog (39)
Structured_descriptionAutomated_descriptionEnriched in NSM and in male based on tiling array and RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including Alovudine; stavudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC28C12.3
Corresponding_transcriptC28C12.3.1
Other_sequenceCRC01434_1
CJC03309_1
CR00328
Associated_featureWBsf228688
WBsf228689
Experimental_infoRNAi_resultWBRNAi00029294Inferred_automaticallyRNAi_primary
WBRNAi00041400Inferred_automaticallyRNAi_primary
WBRNAi00011292Inferred_automaticallyRNAi_primary
Expr_patternExpr1017043
Expr1145431
Drives_constructWBCnstr00028268
Construct_productWBCnstr00028268
Microarray_results (19)
Expression_cluster (84)
Interaction (18)
Map_infoPositivePositive_cloneC28C12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV3.85069
MethodGene