WormBase Tree Display for Gene: WBGene00016179
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WBGene00016179 | SMap | S_parent | Sequence | C28C12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | srlf-2 | Person_evidence | WBPerson260 | |||||
Laboratory_evidence | OH | ||||||||
Sequence_name | C28C12.3 | ||||||||
Molecular_name | C28C12.3 | ||||||||
C28C12.3.1 | |||||||||
CE04110 | |||||||||
Other_name | C28C12.3 | ||||||||
CELE_C28C12.3 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | srlf-2 | ||||||||
DB_info | Database | AceView | gene | 4J253 | |||||
WormQTL | gene | WBGene00016179 | |||||||
WormFlux | gene | WBGene00016179 | |||||||
NDB | locus_tag | CELE_C28C12.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016179|UniProtKB=P50437 | |||||||
family | PTHR21593 | ||||||||
NCBI | gene | 182977 | |||||||
RefSeq | protein | NM_069048.2 | |||||||
SwissProt | UniProtAcc | P50437 | |||||||
TREEFAM | TREEFAM_ID | TF316074 | |||||||
UniProt_GCRP | UniProtAcc | P50437 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-2 | ||||
Other_name | C28C12.3 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srlf | ||||||||
Allele (20) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (24) | |||||||||
Paralog (39) | |||||||||
Structured_description | Automated_description | Enriched in NSM and in male based on tiling array and RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including Alovudine; stavudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C28C12.3 | |||||||
Corresponding_transcript | C28C12.3.1 | ||||||||
Other_sequence | CRC01434_1 | ||||||||
CJC03309_1 | |||||||||
CR00328 | |||||||||
Associated_feature | WBsf228688 | ||||||||
WBsf228689 | |||||||||
Experimental_info | RNAi_result | WBRNAi00029294 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041400 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011292 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017043 | ||||||||
Expr1145431 | |||||||||
Drives_construct | WBCnstr00028268 | ||||||||
Construct_product | WBCnstr00028268 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (84) | |||||||||
Interaction (18) | |||||||||
Map_info | Positive | Positive_clone | C28C12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 3.85069 | |||||||
Method | Gene |