WormBase Tree Display for Gene: WBGene00010886
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| WBGene00010886 | SMap | S_parent | Sequence | M7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srlf-17 | Person_evidence | WBPerson260 | |||||
| Laboratory_evidence | OH | ||||||||
| Sequence_name | M7.10 | ||||||||
| Molecular_name | M7.10 | ||||||||
| M7.10.1 | |||||||||
| CE03490 | |||||||||
| Other_name | M7.10 | ||||||||
| CELE_M7.10 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | srlf-17 | ||||||||
| DB_info | Database | AceView | gene | 4L866 | |||||
| WormQTL | gene | WBGene00010886 | |||||||
| WormFlux | gene | WBGene00010886 | |||||||
| NDB | locus_tag | CELE_M7.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010886|UniProtKB=Q21588 | |||||||
| family | PTHR21593 | ||||||||
| NCBI | gene | 178010 | |||||||
| RefSeq | protein | NM_069672.3 | |||||||
| TREEFAM | TREEFAM_ID | TF316074 | |||||||
| TrEMBL | UniProtAcc | Q21588 | |||||||
| UniProt_GCRP | UniProtAcc | Q21588 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-17 | ||||
| Other_name | M7.10 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srlf | ||||||||
| Allele | WBVar01500079 | ||||||||
| WBVar00435302 | |||||||||
| WBVar00435303 | |||||||||
| WBVar01498996 | |||||||||
| WBVar01499925 | |||||||||
| WBVar00941365 | |||||||||
| WBVar00941366 | |||||||||
| WBVar00941367 | |||||||||
| WBVar01454137 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog (39) | |||||||||
| Structured_description | Automated_description | Enriched in male-specific anatomical entity and in male based on RNA-seq and microarray studies. Is affected by several genes including daf-12; rrf-3; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M7.10 | |||||||
| Corresponding_transcript | M7.10.1 | ||||||||
| Associated_feature | WBsf997764 | ||||||||
| WBsf1018173 | |||||||||
| WBsf230822 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002302 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034485 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051047 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017265 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027010 | ||||||||
| Expr1154755 | |||||||||
| Expr2005284 | |||||||||
| Expr2023503 | |||||||||
| Drives_construct | WBCnstr00031080 | ||||||||
| Construct_product | WBCnstr00031080 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction | WBInteraction000239292 | ||||||||
| WBInteraction000342884 | |||||||||
| WBInteraction000407817 | |||||||||
| WBInteraction000451146 | |||||||||
| Map_info | Positive | Positive_clone | M7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.8608 | |||||||
| Method | Gene |
