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WormBase Tree Display for Gene: WBGene00016732

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Name Class

WBGene00016732SMapS_parentSequenceC46H11
IdentityVersion2
NameCGC_namephat-1Person_evidenceWBPerson980
WBPerson3905
Sequence_nameC46H11.8
Molecular_nameC46H11.8
C46H11.8.1
CE34274
Other_nameCELE_C46H11.8Accession_evidenceNDBBX284601
Public_namephat-1
DB_infoDatabaseAceViewgene1F612
WormQTLgeneWBGene00016732
WormFluxgeneWBGene00016732
NDBlocus_tagCELE_C46H11.8
PanthergeneCAEEL|WormBase=WBGene00016732|UniProtKB=Q9GYJ3
familyPTHR46219
NCBIgene172129
RefSeqproteinNM_059107.3
TREEFAMTREEFAM_IDTF318899
TrEMBLUniProtAccQ9GYJ3
UniProt_GCRPUniProtAccQ9GYJ3
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
202 Feb 2006 09:28:57WBPerson2970Name_changeCGC_namephat-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classphat
Allele (25)
RNASeq_FPKM (74)
GO_annotation00092742
Ortholog (41)
ParalogWBGene00008298Caenorhabditis elegansFrom_analysisPanther
WBGene00008483Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008492Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008493Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008494Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008495Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008841Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010880Caenorhabditis elegansFrom_analysisTreeFam
WBGene00012727Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00012729Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00014057Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015756Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015759Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016731Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016733Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00044147Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00044317Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044315Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018619Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018616Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018618Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044316Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018303Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008893Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009151Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009152Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009417Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009418Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009420Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009421Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009422Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009423Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009424Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010940Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011521Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012044Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013935Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013937Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013939Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013941Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013943Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00014037Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015398Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016781Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016782Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017200Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017203Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017204Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018643Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018646Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018647Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018713Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020237Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020239Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020240Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020241Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020242Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020243Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020244Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021612Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00045497Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionInvolved in pharyngeal gland morphogenesis. Expressed in pharyngeal gland cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC46H11.8
Corresponding_CDS_historyC46H11.8:wp101
Corresponding_transcriptC46H11.8.1
Other_sequencePT04027
Oden_isotig16180
DV019143.1
Tcir_isotig08744
DV019396.1
Name_isotig06303
PTC04675_1
FD516663.1
CSC00108_1
Associated_feature (3)
Experimental_infoRNAi_resultWBRNAi00042631Inferred_automaticallyRNAi_primary
WBRNAi00003171Inferred_automaticallyRNAi_primary
WBRNAi00029882Inferred_automaticallyRNAi_primary
Expr_patternExpr8574
Expr10163
Expr1023120
Expr1037183
Expr1146615
Expr2014882
Expr2033117
Drives_constructWBCnstr00005327
WBCnstr00013372
WBCnstr00014757
WBCnstr00017920
WBCnstr00018257
WBCnstr00018269
WBCnstr00027846
Construct_productWBCnstr00027846
Microarray_results (17)
Expression_cluster (145)
Interaction (108)
Map_infoMapIPosition-0.423078Error0.000245
PositivePositive_cloneC46H11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00032277
WBPaper00036955
WBPaper00038636
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene