WormBase Tree Display for Gene: WBGene00008298
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| WBGene00008298 | SMap | S_parent | Sequence | C54D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C54D10.3 | |||||||
| Molecular_name | C54D10.3 | ||||||||
| C54D10.3.1 | |||||||||
| CE05499 | |||||||||
| Other_name | CELE_C54D10.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C54D10.3 | ||||||||
| DB_info | Database | AceView | gene | 5M899 | |||||
| WormQTL | gene | WBGene00008298 | |||||||
| WormFlux | gene | WBGene00008298 | |||||||
| NDB | locus_tag | CELE_C54D10.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008298|UniProtKB=Q18827 | |||||||
| family | PTHR46219 | ||||||||
| NCBI | gene | 179704 | |||||||
| RefSeq | protein | NM_073715.4 | |||||||
| TREEFAM | TREEFAM_ID | TF318899 | |||||||
| TrEMBL | UniProtAcc | Q18827 | |||||||
| UniProt_GCRP | UniProtAcc | Q18827 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; RIBL; and RIBR based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including Ethanol; rotenone; and mianserin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54D10.3 | |||||||
| Corresponding_transcript | C54D10.3.1 | ||||||||
| Other_sequence | GE626322.1 | ||||||||
| Acan_isotig15610 | |||||||||
| Oden_isotig26141 | |||||||||
| CRC05477_1 | |||||||||
| CJC01778_1 | |||||||||
| CBC03796_1 | |||||||||
| Associated_feature | WBsf232647 | ||||||||
| WBsf232648 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043136 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030136 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021018 | ||||||||
| Expr1147108 | |||||||||
| Expr2001912 | |||||||||
| Expr2020136 | |||||||||
| Drives_construct | WBCnstr00015937 | ||||||||
| WBCnstr00033074 | |||||||||
| Construct_product | WBCnstr00033074 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction (153) | |||||||||
| Map_info | Positive | Positive_clone | C54D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 4.19122 | |||||||
| Reference | WBPaper00041771 | ||||||||
| Method | Gene |
