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WormBase Tree Display for Gene: WBGene00008891

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Name Class

WBGene00008891SMapS_parentSequenceF16H6
IdentityVersion2
NameCGC_nameclec-42Person_evidenceWBPerson655
Sequence_nameF16H6.1
Molecular_name (3)
Other_nameCELE_F16H6.1Accession_evidenceNDBBX284605
Public_nameclec-42
DB_infoDatabaseAceViewgene5S673
WormQTLgeneWBGene00008891
WormFluxgeneWBGene00008891
NDBlocus_tagCELE_F16H6.1
PanthergeneCAEEL|WormBase=WBGene00008891|UniProtKB=Q9XV91
familyPTHR22991
NCBIgene180189
RefSeqproteinNM_075156.4
TREEFAMTREEFAM_IDTF351663
TrEMBLUniProtAccQ9XV91
UniProt_GCRPUniProtAccQ9XV91
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
229 Apr 2005 13:53:46WBPerson2970Name_changeCGC_nameclec-42
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (81)
RNASeq_FPKM (74)
Ortholog (78)
ParalogWBGene00007153Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00008294Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008477Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020220Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015198Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017364Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018105Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010399Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011584Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00009854Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010169Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012023Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012025Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012103Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012582Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016577Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013493Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020327Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020328Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016450Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016451Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012583Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013607Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009856Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009855Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009857Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009859Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012022Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044331Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044332Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009860Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011852Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013608Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013609Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012024Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019928Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00019917Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011853Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00219321Caenorhabditis elegansFrom_analysisPanther
WBGene00015403Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007152Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008593Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008594Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008595Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008596Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008597Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008879Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009291Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011222Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011668Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017199Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020221Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionExpressed in int1DL; int1DR; int1VL; int1VR; and neurons. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF16H6.1
Corresponding_transcriptF16H6.1.1
Associated_featureWBsf647675
WBsf1002843
WBsf1021424
WBsf233158
Experimental_infoRNAi_resultWBRNAi00031048Inferred_automaticallyRNAi_primary
WBRNAi00115655Inferred_automaticallyRNAi_primary
WBRNAi00044829Inferred_automaticallyRNAi_primary
WBRNAi00013428Inferred_automaticallyRNAi_primary
Expr_patternExpr3375
Expr15813
Expr15814
Expr1021726
Expr1148794
Expr2010175
Expr2028417
Drives_constructWBCnstr00011372
WBCnstr00032613
WBCnstr00042533
Construct_productWBCnstr00032613
Microarray_results (18)
Expression_cluster (224)
InteractionWBInteraction000137268
WBInteraction000185339
WBInteraction000191937
WBInteraction000192549
WBInteraction000200854
WBInteraction000208466
WBInteraction000211470
WBInteraction000213476
WBInteraction000221078
WBInteraction000227322
WBInteraction000285101
WBInteraction000285725
WBInteraction000289212
WBInteraction000306180
WBInteraction000324426
WBInteraction000327869
WBInteraction000328502
WBInteraction000335042
WBInteraction000335393
WBInteraction000336825
WBInteraction000350764
WBInteraction000356993
WBInteraction000358791
WBInteraction000370696
WBInteraction000378563
WBInteraction000388523
WBInteraction000392026
WBInteraction000396626
WBInteraction000397802
WBInteraction000400114
WBInteraction000400433
WBInteraction000404575
WBInteraction000404797
WBInteraction000413307
WBInteraction000414637
WBInteraction000419272
WBInteraction000423595
WBInteraction000437038
WBInteraction000439435
WBInteraction000447457
WBInteraction000448771
WBInteraction000453840
WBInteraction000558048
Map_infoMapVPosition14.7815Error0.044228
PositivePositive_cloneF16H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00026629
WBPaper00038491
WBPaper00057576
WBPaper00061178
WBPaper00061236
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene