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WormBase Tree Display for Gene: WBGene00001243

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Name Class

WBGene00001243SMapS_parentSequenceF41H10
IdentityVersion1
NameCGC_nameelo-5Person_evidenceWBPerson79
Sequence_nameF41H10.7
Molecular_nameF41H10.7
F41H10.7.1
CE49372
Other_nameCELE_F41H10.7Accession_evidenceNDBBX284604
Public_nameelo-5
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:23WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classelo
Allele (40)
StrainWBStrain00035719
WBStrain00035748
WBStrain00035975
RNASeq_FPKM (74)
GO_annotation (17)
Ortholog (47)
ParalogWBGene00001239Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001240Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001241Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001242Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001247Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001245Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001246Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00001244Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionThe elo-5 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; ELO-5 is required for normally rapid growth and for normal fatty acid composition.Paper_evidenceWBPaper00004162
WBPaper00005654
WBPaper00005728
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable fatty acid elongase activity. Involved in methyl-branched fatty acid biosynthetic process. Predicted to be located in membrane. Expressed in amphid neurons and intestine.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF41H10.7
Corresponding_CDS_historyF41H10.7a:wp261
Corresponding_transcriptF41H10.7.1
Other_sequence (66)
Associated_featureWBsf230081
WBsf230082
Experimental_infoRNAi_result (46)
Expr_patternExpr3072
Expr4357
Expr1018356
Expr1150911
Expr2011282
Expr2029518
Drives_constructWBCnstr00011114
WBCnstr00011940
WBCnstr00018577
WBCnstr00037016
Construct_productWBCnstr00011114
WBCnstr00018577
WBCnstr00037016
Microarray_results (18)
Expression_clusterWBPaper00028802:intestine_unique
WBPaper00030922:glycosylated_protein
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032528:L3_enriched
WBPaper00033444:BacteriaDiet_regulated
WBPaper00034636:heat_shock_downregulated
WBPaper00037086:biotin_regulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_larva_enriched
WBPaper00038104:DATS_upregulated
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038118:stress_upregulated_N2
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040990:PA14_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045401:N.parisii_40h_downregulated
WBPaper00045401:N.parisii_64h_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046497:B.thuringiensis_downregulated_protein
WBPaper00046795:starvation_downregulated
WBPaper00048810:CoQ-deficiency_downregulated
WBPaper00048988:daf-2(e1370)_upregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049217:TCER-1_downregulated
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049905:Age_variant_expression
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050096:P.aeruginosa_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050193:met-2(n4256)set-25(n5021)_downregulated_L1
WBPaper00050412:cco-1(RNAi)_downregulated_N2
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:intestine_enriched
WBPaper00051245:cytoplasm_specific
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051371:Orsay-virus-infection_downregulated_rde-1(ne219)
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00052987:UV_downregulated_xpc-1;csb-1
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053599:female_vs_male_downregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053814:15C_downregulated_PY79
WBPaper00054192:cold-shock_downregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_downregulated
WBPaper00055969:electromagnetic-field_downregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055981:fog-2(q71)_downregulated
WBPaper00056039:efa-6(tm3124)_upregulated
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056284:ints-2(RNAi)_downregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056826:hmc_biased
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057143:ztf-11(RNAi)_upregulated
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057196:raga-1(ok386)_downregulated)
WBPaper00058711:paraquat_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059117:B.subtilis_downregulated
WBPaper00059191:hsp-16.2p-LIN-29_downregulated
WBPaper00059253:stearic-acid_upregulated
WBPaper00059253:sucrose_stearic-acid_upregulated
WBPaper00059253:sucrose_upregulated
WBPaper00059426:Ag-nanoparticles_upregulated
WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
WBPaper00059739:hira-1(gk835598)_downregulated_adult
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059895:wounding_downregulated
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060084:cco-1(RNAi)_downregulated_lin-40(yth27)
WBPaper00060084:cco-1(RNAi)_downregulated_N2
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:CoCl2_6hr_downregulated_N2
WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
WBPaper00060445:nfki-1(cer1)_upregulated_L1
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060703:nas-38(ok3407)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-extract_1h_regulated
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:R10H10.3-T21H3.1
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061651:Intestine_enriched
WBPaper00061823:mex-3(spr9)_downregulated
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062056:lin-36(we31)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062684:pathogen_upregulated_CB4856
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064789:Day3_vs_Day1_downregulated_neuron
WBPaper00064789:Day6_vs_Day1_downregulated_neuron
WBPaper00064789:Day9_vs_Day1_downregulated_neuron
WBPaper00064789:Day12_vs_Day1_downregulated_neuron
WBPaper00064871:hypoxia_upregulated_F1
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065120:body-muscle-transcriptome
WBPaper00065258:anchor-cell_depleted
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065392:Lb.delbrueckii_downregulated
WBPaper00065746:eat-2(ad1113)_upregulated
WBPaper00065749:Heat-Shock-With-Recovery_downregulated_N2
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:3_0
WBPaper00065841:3_1
WBPaper00065841:3_2
WBPaper00065841:3_5
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00065995:M.humicola-extract_upregulated_N2
WBPaper00065995:M.humicola-extract_upregulated_old-1(ok1273)
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066204:CdCl2_downregulated_mRNA
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_downregulated_WT
cgc4386_cluster_1_3
cgc4489_group_2
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00028789:PA14_vs_gacA_downregulated_4hr
WBPaper00028789:PA14_vs_gacA_downregulated_8hr
WBPaper00028789:PA14_vs_OP50_downregulated_4hr
WBPaper00028789:PA14_vs_OP50_downregulated_8hr
WBPaper00030839:Embryo_A_Class
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00031060:2-deoxy-D-glucose_downregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032062:age_regulated_genes
WBPaper00036286:Pattern_C
WBPaper00036383:ash-2_Day8_regulated
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00038462:aging_downregulated
WBPaper00040184:hcf-1down_sir-2.1up_daf-2nc
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00040876:mir-35_downregulated
WBPaper00040963:Q50_up
WBPaper00040963:Q100_up
WBPaper00040963:Q200_up
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00044091:Bpseudomallei_repressed_2h
WBPaper00044091:Bpseudomallei_repressed_8h
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00045673:colistin_upregulated
WBPaper00047021:MWCNT_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053550:daf-19(m86)_upregulated_L1
WBPaper00057098:SiO2-nanoparticles_downregulated
[cgc6390]:herm_soma-enriched
Interaction (91)
Map_info (4)
Reference (25)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene