WormBase Tree Display for Gene: WBGene00001242
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| WBGene00001242 | SMap | S_parent | Sequence | C40H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | elo-4 | Person_evidence | WBPerson79 | |||||
| Sequence_name | C40H1.4 | ||||||||
| Molecular_name | C40H1.4 | ||||||||
| C40H1.4.1 | |||||||||
| CE00112 | |||||||||
| Other_name | CELE_C40H1.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | elo-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | elo | ||||||||
| Allele (14) | |||||||||
| Strain | WBStrain00031964 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Ortholog (62) | |||||||||
| Paralog | WBGene00001239 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00001240 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001241 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001243 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001245 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001246 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00001247 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001244 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The elo-4 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; its function in vivo is unknown. | Paper_evidence | WBPaper00004162 | |||||
| WBPaper00005728 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Is an ortholog of human ELOVL3 (ELOVL fatty acid elongase 3) and ELOVL6 (ELOVL fatty acid elongase 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C40H1.4 | |||||||
| Corresponding_transcript | C40H1.4.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf667260 | ||||||||
| WBsf717962 | |||||||||
| WBsf227268 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006326 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00102636 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042260 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022960 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011819 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029710 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114843 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095251 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114849 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013821 | ||||||||
| Expr1030788 | |||||||||
| Expr1146251 | |||||||||
| Expr2011281 | |||||||||
| Expr2029517 | |||||||||
| Drives_construct | WBCnstr00037017 | ||||||||
| Construct_product | WBCnstr00037017 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (206) | |||||||||
| Interaction (43) | |||||||||
| Map_info | Map | III | Position | 0.42042 | Error | 0.001736 | |||
| Positive | Positive_clone | C40H1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5074 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024532 | ||||||||
| WBPaper00029292 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059947 | |||||||||
| WBPaper00064105 | |||||||||
| Remark | elo-4 was previously incorrectly connected to F11E6.5 [021023 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
