WormBase Tree Display for Gene: WBGene00001239
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| WBGene00001239 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F56H11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | elo-1 | Person_evidence | WBPerson79 | |||||
| Sequence_name | F56H11.4 | ||||||||
| Molecular_name | F56H11.4a | ||||||||
| F56H11.4a.1 | |||||||||
| CE05979 | |||||||||
| F56H11.4b | |||||||||
| CE47981 | |||||||||
| F56H11.4b.1 | |||||||||
| Other_name | pea-1 | ||||||||
| ceelo1 | Accession_evidence | EMBL | AF244356 | ||||||
| CELE_F56H11.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | elo-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | elo | ||||||||
| Allele (41) | |||||||||
| Strain | WBStrain00003343 | ||||||||
| WBStrain00035534 | |||||||||
| WBStrain00004008 | |||||||||
| WBStrain00053449 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00001240 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00001241 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001242 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001247 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001245 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001244 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001243 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001246 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | elo-1 encodes a component of C-18 polyunsaturated fatty acid (PUFA) elongase that is required for normal elongation of n-6 and n-3 20-carbon PUFA in vivo; ELO-1 is a condensing enzyme that elongates n-6 and n-7 (and, with less efficiency, n-3) series C18 PUFAs. | Paper_evidence | WBPaper00002597 | |||||
| WBPaper00004162 | |||||||||
| WBPaper00004553 | |||||||||
| WBPaper00005233 | |||||||||
| WBPaper00005728 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable fatty acid elongase activity. Involved in unsaturated fatty acid biosynthetic process. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56H11.4a | |||||||
| F56H11.4b | |||||||||
| Corresponding_transcript | F56H11.4a.1 | ||||||||
| F56H11.4b.1 | |||||||||
| Other_sequence (58) | |||||||||
| Associated_feature | WBsf646238 | ||||||||
| WBsf997434 | |||||||||
| WBsf1017974 | |||||||||
| WBsf228840 | |||||||||
| WBsf228841 | |||||||||
| WBsf228842 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Chronogram219 | ||||||||
| Expr6235 | |||||||||
| Expr1019784 | |||||||||
| Expr1030785 | |||||||||
| Expr1152525 | |||||||||
| Expr2011278 | |||||||||
| Expr2029514 | |||||||||
| Drives_construct | WBCnstr00003814 | ||||||||
| WBCnstr00037020 | |||||||||
| Construct_product | WBCnstr00037020 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction (98) | |||||||||
| WBProcess | WBbiopr:00000121 | ||||||||
| Map_info | Map | IV | Position | 4.29121 | Error | 0.001669 | |||
| Positive | Positive_clone | F56H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4280 | |||||||
| Pseudo_map_position | |||||||||
| Reference (24) | |||||||||
| Remark | Sequence connection from [Watts JL, Browse JA] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
