WormBase Tree Display for Expression_cluster: WBPaper00037086:biotin_regulated
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| WBPaper00037086:biotin_regulated | Description | Genes with expression level affected by biotin deficiency. Genes were ranked by log2 (rank metric score) of their mean (n = 3 for each condition) differences between biotin sufficiency and deficiency. Statistical analysis included the t test comparing condition control to condition-deficient, false discovery rate calculation to control for multiple hypothesis testing and calculation of fold change (expressed as log2) value between the two conditions. Authors used these data to produce preordered ranked gene lists, which were then tested for enrichment by Gene Set Enrichment Analysis (GSEA v. 2.0, Broad Institute, Cambridge, Mass., USA). Genes included in this list were those belonging to the leading edge subset of GSEA. Also included are genes with expression level changed 2-fold or over with p <= 0.05. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Data are presented as the mean of 3 different experiments and statistical significance was evaluated by ANOVA at p < 0.05. | ||
| Reference | WBPaper00037086 | ||
| Based_on_WB_Release | |||
| Gene (100) | |||
| Attribute_of | Microarray_experiment | WBPaper00037086:elegans_sufficient_Biotin__1 | |
| WBPaper00037086:elegans_sufficient_Biotin__2 | |||
| WBPaper00037086:elegans_biotin_deficiency__1 | |||
| WBPaper00037086:elegans_biotin_deficiency__2 | |||
| WBPaper00037086:elegans_biotin_deficiency__3 | |||
| Regulation | Regulated_by_molecule | WBMol:00004270 | |
| Associated_with | Life_stage | WBls:0000038 |
