WormBase Tree Display for Expression_cluster: WBPaper00040221:DAF-12_target_ALF4
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| WBPaper00040221:DAF-12_target_ALF4 | Description | Potental DAF-12 target genes identified by ChIP-chip analysis performed on strain ALF4 [daf-12 | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Affymetrix TAS software that computed for each probe estimates of fold enrichment (in linear scale) over hybridization with input DNA. At the same time, TAS calculated for each probe a p-value by applying a Wilcoxon signed rank test. A threshold of 2.5 was selected, which corresponds to probe intensities approximately 2.5 times stronger on the ChIP array than on the Input array. Additional TAS threshold parameters were MinRun=180 bp, MaxGap=300 bp. TAS analysis showed that the selected threshold of 2.5 corresponds approximately to a p-value of 0.01. | ||
| Reference | WBPaper00040221 | ||
| Based_on_WB_Release | |||
| Gene (3110) | |||
| Attribute_of | Tiling_array | ||
| Regulation | Regulated_by_gene | WBGene00000908 | |
| Associated_with | Life_stage | WBls:0000027 | |
| WBls:0000041 |
