WormBase Tree Display for Gene: WBGene00001481

WBGene00001481 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y54E10A
  Identity: Version: 1
    Name: CGC_name: fog-1 Person_evidence: WBPerson261
      Sequence_name: Y54E10A.4
      Molecular_name (13)
      Other_name: cpb-4
        CELE_Y54E10A.4 Accession_evidence: NDB BX284601
      Public_name: fog-1
    DB_info: Database: AceView gene 1D785
        WormQTL gene WBGene00001481
        WormFlux gene WBGene00001481
        NDB locus_tag CELE_Y54E10A.4
        Panther gene CAEEL|WormBase=WBGene00001481|UniProtKB=G5EBS6
          family PTHR12566
        NCBI gene 171895
        RefSeq protein NM_001313541.3
            NM_001313540.3
            NM_001381585.1
            NM_001381586.3
        TREEFAM TREEFAM_ID TF317658
        TrEMBL UniProtAcc A0A0K3ATT1
            G5EBS6
            Q95XX9
            A0A0K3AQU4
        UniProt_GCRP UniProtAcc G5EBS6
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fog
    Reference_allele: WBVar00144581
    Allele: WBVar00241041
      WBVar00241078
      WBVar00241133
      WBVar00087792
      WBVar00241026
      WBVar01475227
      WBVar00330036
      WBVar01475228
      WBVar00330037
      WBVar00241027
      WBVar00330038
      WBVar00241028
      WBVar00330039
      WBVar00330040
      WBVar00241030
      WBVar00330041
      WBVar01421564
      WBVar00241032
      WBVar00241033
      WBVar00028376
      WBVar00241037
      WBVar00241042
      WBVar00241043
      WBVar00241046
      WBVar00241047
      WBVar00241048
      WBVar00095052
      WBVar00241050
      WBVar00241051
      WBVar01931921
      WBVar01931922
      WBVar00241057
      WBVar00241058
      WBVar00241059
      WBVar01622706
      WBVar01622707
      WBVar00241074
      WBVar00241076
      WBVar00296369
      WBVar02083828
      WBVar00144428
      WBVar00095071
      WBVar00624892
      WBVar00624893
      WBVar00624894
      WBVar00241091
      WBVar00624895
      WBVar00624896
      WBVar00241094
      WBVar00241095
      WBVar00624897
      WBVar00624898
      WBVar00241096
      WBVar00624899
      WBVar00624900
      WBVar00624901
      WBVar00624902
      WBVar00624903
      WBVar00624904
      WBVar00624905
      WBVar00624906
      WBVar00624907
      WBVar01415355
      WBVar00624908
      WBVar00624909
      WBVar00624910
      WBVar00624911
      WBVar00624912
      WBVar00624913
      WBVar00624914
      WBVar00624915
      WBVar00624916
      WBVar00241134
      WBVar00241135
      WBVar00624917
      WBVar00144581
      WBVar00624918
      WBVar00144582
      WBVar00624919
      WBVar01846107
      WBVar00624920
      WBVar00624921
      WBVar00624922
      WBVar00624923
      WBVar00241146
      WBVar02028432
      WBVar02028433
      WBVar01492047
      WBVar01499416
      WBVar01499786
      WBVar01276251
      WBVar01499985
      WBVar01391830
      WBVar01391831
      WBVar00097393
      WBVar00097394
      WBVar00097396
      WBVar01276362
      WBVar01430981
      WBVar01430982
      WBVar01430983
      WBVar00296492
      WBVar01662684
      WBVar01982128
      WBVar01982129
      WBVar01762260
      WBVar01982130
      WBVar01982131
      WBVar01762261
      WBVar01762262
      WBVar02126824
      WBVar01982132
      WBVar01982133
      WBVar01982134
      WBVar01982135
      WBVar01982136
      WBVar00151928
      WBVar01982137
      WBVar01602908
      WBVar01602909
      WBVar01602910
      WBVar01602911
      WBVar01602912
      WBVar01602913
      WBVar01602914
      WBVar01531817
      WBVar01956666
      WBVar01602915
      WBVar01602916
      WBVar01602917
      WBVar01602918
      WBVar01602919
      WBVar01602920
      WBVar01988422
      WBVar01602921
      WBVar00241019
      WBVar01602922
      WBVar01602923
      WBVar01602924
    Possibly_affected_by: WBVar02158428
    Legacy_information: e1959sd : homozygous XX animals transformed into fertile females; homozygous and heterozygous XO animals are somatically male with both sperm and oocytes in germline. ES2 (adults). NA3.
      See also e1959
      [C.elegansII] e1959sd : homozygous XX animals transformed into fertile females; homozygous XO animals are somatically male, make oocytes in germ line; heterozygous XO animals are somatically male with both sperm and oocytes in germline. ES2 (adults). OA>10: e2121, e1959, e2122, q155, q253ts (fertile at 15C). [Barton and Kimble 1990; Ellis and Kimble 1995; JK; RE]
    Strain: WBStrain00022517
      WBStrain00022535
      WBStrain00022541
      WBStrain00022595
      WBStrain00022628
      WBStrain00022633
      WBStrain00022660
      WBStrain00022661
      WBStrain00004543
    RNASeq_FPKM (74)
    GO_annotation (26)
    Ortholog (37)
    Paralog: WBGene00000770 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00000771 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00000772 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Concise_description: fog-1 encodes a cytoplasmic polyadenylation element binding (CPEB) protein; FOG-1 is required for specification of the sperm fate; FOG-1 binds its own 3'-UTR and fog-1 expression is directly regulated by FBF-1 and FBF-2. Paper_evidence: WBPaper00004396
            WBPaper00005045
            WBPaper00026645
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 11 Apr 2014 00:00:00
      Automated_description: Enables mRNA 3'-UTR binding activity. Involved in cell fate specification; germ-line sex determination; and spermatogenesis. Located in cytoplasm and nuclear periphery. Expressed in germ line. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y54E10A.4a
      Y54E10A.4b
      Y54E10A.4c
      Y54E10A.4d
    Corresponding_transcript: Y54E10A.4a.1
      Y54E10A.4a.2
      Y54E10A.4b.1
      Y54E10A.4c.1
      Y54E10A.4d.1
    Other_sequence: CRC04533_1
      MH07524
    Associated_feature (6)
  Experimental_info: RNAi_result (15)
    Expr_pattern (11)
    Construct_product: WBCnstr00022307
    Regulate_expr_cluster: WBPaper00048762:FOG-1_associated
    Antibody: WBAntibody00000874
      WBAntibody00000966
    Microarray_results (27)
    Expression_cluster (148)
    Interaction (73)
  Map_info: Map: I Position: -4.47297 Error: 0.001409
    Well_ordered
    Positive: Positive_clone: Y54E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Negative: Outside_rearr: sDf4
    Mapping_data: 2_point: 2502
      Multi_point (19)
      Pos_neg_data: 3183
        8068
        5693
        6211
        6228
        6566
        6627
        8064
        8533
  Reference (141)
  Picture: WBPicture0000013095
  Method: Gene