WormBase Tree Display for Variation: WBVar01276362
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| WBVar01276362 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01276362 | ||||
| Other_name | cewivar00679766 | |||||
| Y54E10A.4a.1:c.984+257_984+258insA | ||||||
| Y54E10A.4c.1:c.819+257_819+258insA | ||||||
| Y54E10A.4a.2:c.984+257_984+258insA | ||||||
| Y54E10A.4b.1:c.1626+257_1626+258insA | ||||||
| HGVSg | CHROMOSOME_I:g.3216019_3216020insA | |||||
| Sequence_details | SMap | S_parent | Sequence | Y54E10A | ||
| Flanking_sequences | CCGAAAAATACCCGAAAATTTAAATGATTTTTTCAATTTTGAAAAAATTT | AAAAAAACGACGTTTTTTGAGTTCCCGCGCAAATTAATGACAGTTTTTAA | ||||
| Mapping_target | Y54E10A | |||||
| Type_of_mutation | Insertion | A | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | ||||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539009273 | ||
| History | Acquires_merge | WBVar01403163 | ||||
| WBVar01956667 | ||||||
| Status | Live | |||||
| Affects | Gene | WBGene00001481 | ||||
| Transcript | Y54E10A.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | Y54E10A.4a.1:c.984+257_984+258insA | |||||
| Intron_number | 9/10 | |||||
| Y54E10A.4c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | Y54E10A.4c.1:c.819+257_819+258insA | |||||
| Intron_number | 3/3 | |||||
| Y54E10A.4b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | Y54E10A.4b.1:c.1626+257_1626+258insA | |||||
| Intron_number | 9/9 | |||||
| Y54E10A.4a.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | Y54E10A.4a.2:c.984+257_984+258insA | |||||
| Intron_number | 5/6 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
