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WormBase Tree Display for Variation: WBVar01762262

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Name Class

WBVar01762262NamePublic_nameWBVar01762262
Other_namecewivar00462136
Y54E10A.4c.1:c.370-394G>A
Y54E10A.4b.1:c.1177-394G>A
Y54E10A.4a.2:c.535-394G>A
Y54E10A.4a.1:c.535-394G>A
HGVSgCHROMOSOME_I:g.3214919G>A
Sequence_detailsSMapS_parentSequenceY54E10A
Flanking_sequencesTATAATAACACAAAAAAAATCAAGTTCTTTCATTATTTTTCAGTATAAAACCTGAACTTT
Mapping_targetY54E10A
Source_location225CHROMOSOME_I32149213214921From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001481
TranscriptY54E10A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4a.1:c.535-394G>A
Intron_number8/10
Y54E10A.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4c.1:c.370-394G>A
Intron_number2/3
Y54E10A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4b.1:c.1177-394G>A
Intron_number8/9
Y54E10A.4a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4a.2:c.535-394G>A
Intron_number4/6
MethodWGS_Flibotte